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Information for unigene UN20561

FASTA Sequence
Unigene ID: UN20561Length: 1693 SSR 
GGGCAGCCTACATGCCCCTTTGCGGAACACCCACCCATTCTCTATCCATTCATTTTCCTAACTTAAGAGAGAAAGAAAGAGAGAAG
CTGAATAAAAGGTTGTGTAAGAATCTCGGCTCTGTTTCTAAGGATCTGTGTGTTTGTCTTTTAAGTTTCAGCGATTCAACTTGAGA
AGATAGATAAGTAATTCAGAAGATCTTGTCTTATACGAAATTAAAAATCTGGTAAAGAAGATGGGTTACATGTGTGACTTCTGTGG
TGAACAAAGATCTATGGTGTACTGTCGATCCGATTCAGCCTGTCTCTGTCTCTCTTGTGACCGGAGTGTTCACTCGCTAACGCATT
GTCCAAGCGACATTCTCGTACACTTGTCTGTGAGAGATGTAATGCTCAGCCTGCAAATGTCAGGTGTGTTGAAGAAAGAGTCTCAC
TCTGCCAAAACTGTGATTGGTCAGGCCATAACAACAACAACAACAACAACAACTCTTCTTCAAATGATCACAAGAGGCAGACTATA
AGCTGCTATTCTGGTTGCCCTTCAAGCTCTGAGCTCGCCTCTATCTGGTCTTTTTGCTCGGACTTACCCGGAGAATCCGCTTGTGA
ACAAGAGATGGGTATGATGAATATAGATGATGATGATGAGGATAAGAAAGATGTCGCCGTTGGCTCCTCTTCAATGCCTGATGAAA
ACAGCTCTTGTTATGGTTTGAAGGATGATCTTGAAGTGTGTGAAGATGATTTTTATGGGAACTTGGGTATGGATGAAGTTGACTTA
GCTCTTGAGAACTACGAAGAGCTTTTTGGGACAGCCTTTAACGCCTCGGGACAGCTCTTCGGACAAGGTGGAATCGATAGTCTTTT
CCAGAAACATCATCAAGCAGCAGCTGCAGCTCCTGAGAGAGGGAGTACGGTGCAGCCAGATGAGAGTAATGACTCGTTCATGAGTT
CTAAAACGGAGCCAATCATTTGCTACACGTCGAAGAACATATCATTCTCTGGAGTCACTGGAGAAAGTAGTGCTGGAGATTTCCAA
GAATGCGGTGCATCATCTTCCGTGCAGCTCTTGGGAGAGCCACCATGGTATCCTCAAACATCATCACAGGATCATACTGCTTGTTC
ACATTCAGTGACACGTAATAACGCGGTTATGCGTTACAAGGAAAAGAAGAAGGCTCGCAAGTTTGATAAGAGAGTGAGGTATGCTT
CTCGGAAAGCAAGAGCTGATGTGAGAAGGCGTGTAAAGGGGAGATTTGTCAAAGCTGGTGAAGCGTATGACTACGACCCACTCACC
CCAACCAGAAGCTATTGAGTGGATTCTTCTCCTTGAGAGGTAAACAAATGTAGGTATAGATGGCGGGAAAATCGAAACAAGAAAGG
TTTTATTGACTTATGGAGAGAGAGTTCTCAAGTCAGAAACAAGACTGGTTTCTGGTTTGAGAAGATACTAGACTGATGATCATTGT
AAGCAATCATTCATTCTTGGGATTTAATCGTTTTTTTTGCCTCAAAAGCTTCAATCAATTTCCATGAGTTATGTTCTCTTGGTAGT
CAAATGGTTTTTGGCAGGGAGATTTAGGGTAAGATTTTTTTTTGGAACAAATGGGTAAAGATTAAACAATATGATTGTATTATATG
ACTTTCTTTCAATTTGTTTGTATGCTTAATTATAAATGCTCTCTTTGTTTTAAAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADK63401 B-box type zinc finger protein [Brassica rapa]12211e-131
XP_002264506 PREDICTED: hypothetical protein [Vitis vinifera]9048e-095
NP_187422 zinc finger protein CONSTANS-LIKE 9 [Arabidopsis thaliana]9012e-094
XP_002882541 hypothetical protein ARALYDRAFT_478095 [Arabidopsis lyrata subsp. lyrata]8912e-093
XP_002865623 zinc finger (B-box type) family protein [Arabidopsis lyrata subsp. lyrata]7004e-071

Swiss-Prot top hits (Blast detail)Scoree value
Q9LUA9 Zinc finger protein CONSTANS-LIKE 1010585e-114
Q9SSE5 Zinc finger protein CONSTANS-LIKE 99017e-096
Q9LJ44 Zinc finger protein CONSTANS-LIKE 122672e-022
O23379 Putative zinc finger protein CONSTANS-LIKE 112475e-020
O82256 Zinc finger protein CONSTANS-LIKE 131679e-011

TrEMBL top hits (Blast detail)Scoree value
A1A6H1 AT3G07650 protein9011e-094
B9IAW0 Predicted protein (Fragment)5552e-054
A5X2R6 SLL2 protein5452e-053
A5X2R7 SLL2 protein5372e-052
A5X2T0 SLL2 protein5319e-052

Arabidopsis top hits (Blast detail)Scoree value
AT5G48250.1 zinc finger (B-box type) family protein10593e-115
AT3G07650.1 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding9025e-097
AT3G07650.2 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding9025e-097
AT3G07650.3 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding9025e-097
AT3G07650.4 COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding9025e-097

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  20%
 
121  20%
 
73  60%

Unigene MembersMember information