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Information for unigene UN20586

FASTA Sequence
Unigene ID: UN20586Length: 1058 SSR 
GGCCCGCCAAAACGTAGAAGAAACTCTACTATCTCCCCTTCGCGATCAAAAACCTTCCTCTGTCTCTCTTCTTCTTCTATAGTTCG
TAGAATCGGAAAGGGGATCGATCTGATCTTCAAATCAAATTCTAAACCCAGTGGGAACTGAGATCTCTTGAGAGAGAGATTATCAA
TGGCTGGACAGACTGATCCTCACATCTCACTGTTTTCTCCTCAAGAGGTTGAGTTCATGGCAGAAGACGAAATGGTGGAGATTGTT
CCCAACATGAACATGGACCCGCTCAACTTCATCGCTGGGGATTATGGTCGGTTCGTTCCTCAGATTCCAACGCAAGTGCCTCTGTG
GCTTGCAGTGGCACTGAAGCGGAGAGGCAAATGCACTTTCCGCCCTCCTGCCTGGTTGTCTGTTGACAATTTGACTCAGGTCTTGG
AAGCAGAACGGGAACCTCAGTCTAAATTTCAGCCATTACCATCTGGTTACATTGAGATTGCTAGACTGCTTTTTGATCATGCACGT
GATGATATTCCAGACATGTATATGGTGAAATCACTAGTCGAGGACATCAGAGATGTGCGGCTTCACAAACTCGAGACTAACTTGGG
AACGTTTGGAGCAGATACAACTGCAGTAAAGATGAATAATGTATCTGCAATGGAAGTGAACCTAGTCCGGCCATTTGTGATAAGAG
CCTTAGAAGCGTTTTATAAGCATGACAAGCCAGAGCGTGATGCAGACAGAGATGCTAAGTAGTAGTAGTAGTAGTAGACAACCACC
CCGTGAAGCTAACAATGAACCACGGAGACCTCTAAGGCAACGCTAAGGAGCTTCGGTTTCTTCTGTGCTAATATTGGTGGAGCTCC
CTGGGGAATTGAGAACATCAACAGCGTTTATCTCTCTGTCTTACTATTTTCCTTGTTTCTCTTGTTCGGTTACATGCTCTTCGATA
TGTATCAAGCATCGTTGCAGTGGTTTTGATATTCAGTAGAGTTGGATTCTTGTGTGACTAGTTCTACTTATGAAAATGTGAACAGT
AGACGAAAACCCATATTGATAAGCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187859 DNA replication complex GINS protein PSF2 [Arabidopsis thaliana]8642e-090
BAB03160 unnamed protein product [Arabidopsis thaliana]8642e-090
XP_002884909 hypothetical protein ARALYDRAFT_897460 [Arabidopsis lyrata subsp. lyrata]8597e-090
ABB89770 At3g12530-like protein [Boechera stricta]8552e-089
NP_001030680 DNA replication complex GINS protein PSF2 [Arabidopsis thaliana]7647e-079

Swiss-Prot top hits (Blast detail)Scoree value
Q9C7A8 DNA replication complex GINS protein PSF28648e-092
Q9Y248 DNA replication complex GINS protein PSF23442e-031
Q9D600 DNA replication complex GINS protein PSF23432e-031
Q7ZT46 DNA replication complex GINS protein PSF23361e-030
Q54BL9 Probable DNA replication complex GINS protein PSF23217e-029

TrEMBL top hits (Blast detail)Scoree value
Q1L0Q3 At3g12530-like protein8551e-089
Q2V3W6 Putative uncharacterized protein At3g12530.27645e-079
B6SJM9 DNA replication complex GINS protein PSF27036e-072
C5X6G7 Putative uncharacterized protein Sb02g0439907036e-072
B4FLH9 DNA replication complex GINS protein PSF26955e-071

Arabidopsis top hits (Blast detail)Scoree value
AT3G12530.1 PSF28647e-093
AT3G12530.2 PSF27643e-081

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  67%
 
91  33%

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