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Information for unigene UN20609
| FASTA Sequence |
| Unigene ID: UN20609 | Length: 833 |
SSR | | GCTATGTGAAGGCTCCATCATTTCTTTCAATCCACATGGGTGTTAAAGCAGAGGTTCTTCCTCCGGATACAGATTGCCATCATTTC
GTACTTGAGGATGATTGGAAGAATCTGGAGAAGCCTTATGGCAGTATCTTCCTCAGCATTCCAACCATTCTTGATCCATCTTTGGC
TCCAGATAGTCGACATATACTCCACATATTTACAACCTCTTCCATCGAGGATTGGGAGGGACTCACTCCAAAAGAGTATGAGGCGA
AAAAAGAAGAGGTGGCAGCTGGAATCATACAGAGGCTAGAGAGAAAACTGTTTCCTGGCCTCAGTTCATCTATTACTTTTAAGGAG
GTGGGCACACCAAGAACACACAGGCGATATCTTGCTCGGGATAAAGGAACTTACGGGCCAATGCCAAGAGGAACACCAAAAGGTTT
ACTAGGCATGCCGTTTAACACAACTGCTATAGATGGTTTGTACTGCGTTGGGGATAGTTGTTTTCCTGGTCAAGGAGTTATAGCTG
TGGCTTTCTCAGGAGTGATGTGTGCTCATCGTGTAGCTGCTGACATTGGGCTTGAGAGAAAATCAAAGGTACTTGATGCTGGTCTT
CTTGGTTTACTTGGTTGGCTAAGGACACTCGCATAGGTCTAAGGGTAGAAGGGACAAAGCTAGTGACGATCAGTGGAAGTGTTCCT
CAAGTCCATGAGAAGGGCTTTACTATGAACAATGTTTTTATTTTTGTGGTTTAGGACCAAGAAAAGTTGCACATAGATAAGAAAAA
TATATATATATGTTTTGTCTTTCTCTGCATAACACTGATATAAATCAAATTTAAGGAGT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002892360 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1070 | 2e-114 |
| AAF63149 Similar to phytoene dehydrogenase [Arabidopsis thaliana] | 1067 | 3e-114 |
| NP_172167 carotenoid isomerase [Arabidopsis thaliana] | 1067 | 3e-114 |
| Q8S4R4 RecName: Full=Carotenoid isomerase, chloroplastic; Short=CrtISO; AltName: Full=Protein tangerine; Flags: Precursor | 995 | 7e-106 |
| BAE79546 carotenoid isomerase [Chrysanthemum x morifolium] | 979 | 5e-104 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q9M9Y8 Carotenoid isomerase, chloroplastic | 1067 | 2e-115 |
| Q8S4R4 Carotenoid isomerase, chloroplastic | 995 | 3e-107 |
| Q2VEX9 Carotenoid isomerase, chloroplastic | 960 | 4e-103 |
| Q52QW3 Carotenoid isomerase 1, chloroplastic | 925 | 4e-099 |
| Q52QW2 Carotenoid isomerase 2, chloroplastic | 923 | 8e-099 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q2HXK3 Carotenoid isomerase | 979 | 4e-104 |
| B9H9N3 Predicted protein | 977 | 6e-104 |
| D0FZ29 Carotenoid isomerase | 976 | 8e-104 |
| B9IIH0 Predicted protein | 969 | 5e-103 |
| B9SDN0 Carotenoid isomerase, chloroplast, putative | 954 | 3e-101 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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