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Information for unigene UN20626

FASTA Sequence
Unigene ID: UN20626Length: 1943 SSR 
TTCTCCGCCGCGAAGCCCGCCGCCGCTACGCCGCCGTCTGTGTCTGTCTCCCACACCGGTGGAGGATTCTTCTCTAATAAGTCTGT
CCTACTCGGTATGTTCCTCCTCGCCTTGCCGTTGTTTCCTTCTCAGGCTCCCGATTTTGTCGGAGAGACGGTTCTCACCAAGCTCT
GGGAGCTGATCCACCTCCTGTTCGTCGGCATTGCCGTCGCTTACGGTTTGTTTAGCCGTAGGAATGTCGAATCAAATGTGGAGTTA
AGGAGGAGTGGTGTAGATGATGAGTCTTCCTTGTCATACGTGTCTAGAATCCTCCAGGTTTCCTCTGTTTTCGACGAGGAGGAGGA
GTTGGAGAATCCATGTAGTTTTGTTGATGTGAGTGCTCGAGCTTCTGCGGTGGTGAAAGAGATGAATAAGTCTGATTCCTTCGCTG
TGGATGAATCTTTGTCTGAATATGGTGAGATCAATCAAGTGCAAGCTTGGAACTCGCAGTATTTTCAAGGAAGGTCTAAGGTTGTG
GTTGCTCGACCAGCTTATGGTCTTGATGGTCACCACGTTGTGCACCAGTCACTAGGCTTGCCGGTTAGGAGTTTAAGGTCGGGTTT
GAGAGACGATGCAGCTGTTGAGGACAAGGAGAAAGCTGAGGAAGAGTCACTGGCTGCTCCTTCTTCTCCATGGCATTCTAGTCCTG
AAATGATGGGAATGGGAGACGATGAAACCCAGTTTACGACCCGGCGGTCTAGTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCATCA
CAAACTAGCTTTGAGTCCAATGACCAGAAGAACAGATACTCGCCTTCTCGTTCTGTCTCTGAAGAGTCGTTAAACTACAATGTGGA
GGAGAAGAGTCTTCAGGGTTCATCACGGTCTAGTTCGCCGTCATTGCAACCATCACCATCACTATCTCCACCATCTCCAGAGTTAG
TTACCGATGATTCTCACAGGCGTGTGTTACATTCTCGGCATTACAGTGATGGTTCTTTGTTAGGATGTGAAGATAAACTAGACGGA
CCAGGATCTGAATCAGTTAAGCTCACTCGCAGATCTTATCCTCCTGATGGTTCTGATCATTCCACTACTAGTAGAAGACGGTATCT
TCAGCAGAAGAGCGATAGCCATTTGTTTGAGAAAGGATTAGAGTCTGATGACCATAACAAGATGAGTGTCAAGAAGGTGCGGAGCC
ACGAGTCTTTGGAGTTCCAACCAAGGCGTGCAATGCGTTCTTCACGAGGGGGCAGCGACACTTTGGTGGTGAAAGACAACAAAAAA
AACTCAGCGGATGATGATGCTGACGACTCTGAGGATTATGATCTTCCTGGTGAGGAGAACAAGGAAGTGATATCAAACAGTCTGCA
ATCTTGGAGAGGTTCTAGTAAAGTTTCATCTAGAGGAAAGTCAGTGAGGACCATAAGATCTGACCGCAACCATGGTGATTCATCTG
CTGATGACAGAGGGGAAAGTCATGGAAGAACAAAACCAAGAAGACAATGGCAACAAGAACTAGCAATAGTACTACACCAGGAGAAG
CAGCATTCAGAGCCTGAAGATGATGCGGAAGAGACCGAGACCGAGGCTGAGCAACCCCAAGAAACCTTAGAGGAGGAAGAGGAAGT
TGCTGCTTGGGAAAGCCAGAGCAATGTAAGCAATGAGCATTACGAAGTTGATAGAAAGGCTGATGAGTTCATAGCCAAGTTCAGAG
AACAGATTAGGTTGCAGAAACTACATTCAGGTGAGCAGCAACGTAGAGGAGGTGGGACTGGCGTTATCAGAAACAGCCATTTCAGA
TGATACTACTACACTCACCATTGCTTCATTCACTTTGTATTATTTTGATGTAATAATTGTTTACAGTCATTGTTGATGAGAATCTT
GAGTTCTCTCTGTTTGAGATTTATATTGTTGAATAAAATGATTTTTTTTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191597 uncharacterized protein [Arabidopsis thaliana]6791e-068
XP_002878332 hypothetical protein ARALYDRAFT_907560 [Arabidopsis lyrata subsp. lyrata]6673e-067
XP_002272713 PREDICTED: hypothetical protein [Vitis vinifera]2669e-021
CAN81597 hypothetical protein VITISV_039396 [Vitis vinifera]2613e-020
ADN34231 hypothetical protein [Cucumis melo subsp. melo]2604e-020

Swiss-Prot top hits (Blast detail)Scoree value
Q75JC9 Uncharacterized protein DDB_G02716701633e-010

TrEMBL top hits (Blast detail)Scoree value
Q9M221 Putative uncharacterized protein T8B10_406798e-069
A5BYA3 Putative uncharacterized protein2612e-020
B9RD16 Putative uncharacterized protein2513e-019
B9SZP6 Putative uncharacterized protein2504e-019
B9GYL9 Predicted protein2471e-018

Arabidopsis top hits (Blast detail)Scoree value
AT3G60380.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 5716 Blast hits to 3635 proteins in 329 species: Archae - 2; Bacteria - 249; Metazoa - 2628; Fungi - 569; Plants - 209; Viruses - 24; Other Eukaryotes - 2035 (source: NCBI BLink).6794e-071
AT4G16790.1 hydroxyproline-rich glycoprotein family protein1803e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  33%
 
92  67%

Unigene MembersMember information