 |
Information for unigene UN20629
| FASTA Sequence |
| Unigene ID: UN20629 | Length: 1275 |
SSR | SNP | GGAGAGTACATCGTAACGACCAACGAGGAAAAAATAACTCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAATGGAGAAGAT
TGTTAAGGTAGCTTATGACGCATCCGTGAAGACAGTTTTAACACTGTTGGAGAAGAATCTTTTACCAGATGTTGTCATAAGGCGGT
TGACGCGTCTGCTTCTCGCCGGTCGACTTCGTTCCGGTTACAAACCCACGGCGGATCTGCAACTTTCCGATCTCCTCCGTTTCGTC
AACGCTATAAAAGAGATGCCTATAGCGATCAACACCGAGAAGCCAAAGACTCAACACTATGAATTACCAACAGCTTTCTTCGAGCT
TGTTCTTGGAAGAAACATGAAATACAGCTCTTGCTACTTCTCTAACGATTCAAGTAGCCTAGAAGATGCAGAGGAAGCAATGCTGG
CTCTATATTGCCAGAGGGCTAAAGTGGAAGATGGACAGAGTGTTCTTGATGTCGGATGTGGCTGGGGATCTTTGTCCTTGTACATT
GCCCGCAAGTACAGCAACTGCAAGATAACAGGTCTCTGCAACTCAAAAACACAGAAAGCATTCATCGAGGAGCAATGCTGGAAACG
TGGGATTCAAAATATCGAAATAATGGTTGGAGATATTAGCACATTTGAGCATGAAGGGACATATGACCGAGTATTCTCCATCGAAA
TGTTCGAGCATATGAAAAACTATGGGGAGCTTCTGAAGAAAATTGGAAAGTGGATGAAGGAAGATGGTCTTCTGTTTGTTCACTAT
TTCTGCCATAAGACATTTGCTTACCACTTTGAGGATGTGAATGACGATGACTGGATCACAAGACACTTCTTCAGTGGAGGAACAAT
GCCATCAGCAAATCTTCTCCTCTACTTCCAAGAAGATGTTGCGATTGTGGATCATTGGCTACTAAATGGGAAGCATTATGCAAATA
CCAGTGAAGAGTGGCTGAAAAGAATGGACAAGGAGAGAGTTGCGATAAAGGAGATAATGGAAATGACTTATGGGAAAGAGGAGGCA
GTGAAGTGGACGGTTTACTGGAGAACCTTCTTCATCGCGGTTGCTGAGCTTTTTGGATACAACAATGGAGAAGAGTGGATGGTTTC
ACACTTCTTGTTCAAGAAGAAGTGATTTACATATCTTTCTTCTCTTATTTATCAGTTCTTGAAATTTCGTGTGCCAAAAATAAAGA
ATACTACAACATTCTGCTTCTAGTATGTTTTCCTATTTTTTTTTTTTAAAAAAGTTGCTCAATTTGGGATC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867201 coclaurine N-methyltransferase [Arabidopsis lyrata subsp. lyrata] | 1743 | 3e-192 |
| AAM65762 coclaurine N-methyltransferase [Arabidopsis thaliana] | 1712 | 1e-188 |
| NP_567912 S-adenosyl-L-methionine-dependent methyltransferase-like protein [Arabidopsis thaliana] | 1708 | 3e-188 |
| BAC42939 unknown protein [Arabidopsis thaliana] | 1705 | 7e-188 |
| NP_195038 S-adenosyl-L-methionine-dependent methyltransferase-like protein [Arabidopsis thaliana] | 1611 | 6e-177 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0A9H8 Cyclopropane-fatty-acyl-phospholipid synthase | 229 | 4e-018 |
| P0A9H7 Cyclopropane-fatty-acyl-phospholipid synthase | 229 | 4e-018 |
| P31049 Uncharacterized methyltransferase in lpd-3 5'region | 228 | 6e-018 |
| A5U866 Cyclopropane-fatty-acyl-phospholipid synthase 1 | 185 | 5e-013 |
| P0C5C2 Cyclopropane-fatty-acyl-phospholipid synthase 1 | 185 | 5e-013 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L9U0 Coclaurine N-methyltransferase | 1712 | 7e-189 |
| Q8L788 Putative uncharacterized protein At4g33110 | 1708 | 2e-188 |
| Q8GXB6 Putative uncharacterized protein At4g33110/F4I10_40 | 1705 | 5e-188 |
| Q84TE2 At4g33120 | 1611 | 4e-177 |
| B9INF4 Predicted protein | 1493 | 2e-163 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G33110.1 coclaurine N-methyltransferase, putative | 1709 | 9e-191 |
| AT4G33120.1 coclaurine N-methyltransferase, putative | 1612 | 2e-179 |
| AT3G23510.1 cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative | 250 | 1e-021 |
| AT3G23470.1 cyclopropane-fatty-acyl-phospholipid synthase | 214 | 2e-017 |
| AT3G23530.1 cyclopropane fatty acid synthase, putative / CPA-FA synthase, putative | 208 | 1e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
