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Information for unigene UN20630
| FASTA Sequence |
| Unigene ID: UN20630 | Length: 1159 |
SSR | | AGGGGGAAGATTTGTTCGCATCTGATTCCTCCGATCTCCCATGGCTAAGAGGTTTTGCTAACAAACGCTATAAGAGCTTTCGCTGG
GTGAAGGATAGAGAGAGAGAGAGATAGATCTCTTTTAACACCCTTCCCGCCCCTCGATTAAACGTGTCAAAAGTCTCACACTTTAA
GAGTTTTCGAGAAGGATTAGAAAAATGGCAGATGGGATATCGAGCTTCTGGGGTCCAGTGACTTCCACCATAGAGTGTTGTGAGAA
GAACTACTCCTACTCCTCTTACATTGCAGAGTTCTACAACACCATCTCCAACGTCCCTGGGATCCTCTTGGCTCTCATCGGTCTCG
TCAATGCCTTAAGGCAACGGTTCGAGAAGAGGTTCAGCATCCTCCACATCTCCAACATGATCCTCGCTATCGGCAGCATGCTCTAC
CATGCCACTTTGCAGCACGTGCAACAGCAGAGCGATGAGACGCCGATGGTGTGGGAGATACTTCTCTACATGTACATCCTTTACTC
GCCGGACTGGCATTACAGAAGCACCATGCCCACTTTTCTCTTCCTCTACGGTGCTGCTTTCGCTGTCGTCCACGCTTTCCTCAGGT
TTGGGATCGGTTTCAAGGTCCACTACGTGGTCCTCTGTCTTCTTTGCATCCCTCGGATGTACAAGTACTACATTCACACGGAGGAC
ACCGCGGCTAAAAGGATTGCGAAGTGGTATGTCGCCACGATTCTTGTGGGGAGTGTTTGCTGGTTCTGTGACCGTGTTTTCTGCGA
GAGGATATCTCAGTGGCCTGTGAATCCTCAGGGGCATGCTCTGTGGCATGTGTTCATGAGTTTCAACTCCTACTGTGCAAACACGT
TCTTGATGTTCTGTCGAGCTCAGCAGCGTGGATGGAATCCGAAGGTTAAATACTTTCTGGGAGTTCTTCCTTACGTCAAGATCGAG
AAGCCAAAAGCAGAATGAGAAGCAGAATAGGGGAGAAAAAGAGCCCAGAAGATCATAAATATAGTTTTTTGTTCATCGTTTTGTCA
GAAATTTCAATGTTGGTTTTCTTTTTTTGGAAGTGAAAGTACTCTCTAGATACAGAGTCTAGAATTTTTTTGTTCTTGTATTAGTT
TTCTTGGGGATGATGATCTTATGAAGAATTGATTTTTAACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567660 dihydroceramidase [Arabidopsis thaliana] | 1359 | 8e-148 |
| XP_002869828 ATCES1 [Arabidopsis lyrata subsp. lyrata] | 1357 | 1e-147 |
| CAA16783 putative protein [Arabidopsis thaliana] | 1274 | 6e-138 |
| XP_002518399 alkaline phytoceramidase, putative [Ricinus communis] | 1204 | 8e-130 |
| XP_002331534 predicted protein [Populus trichocarpa] | 1202 | 1e-129 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9NUN7 Alkaline ceramidase 3 | 319 | 1e-028 |
| P38298 Alkaline ceramidase YPC1 | 190 | 1e-013 |
| Q02896 Alkaline ceramidase YDC1 | 189 | 2e-013 |
| Q8TDN7 Alkaline ceramidase 1 | 149 | 7e-009 |
| Q9VIP7 Alkaline ceramidase | 135 | 3e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94IB9 Acyl-CoA independent ceramide synthase | 1359 | 5e-148 |
| O49638 Putative uncharacterized protein AT4g22330 | 1274 | 4e-138 |
| B9RXD0 Alkaline phytoceramidase, putative | 1204 | 5e-130 |
| B9N8I5 Predicted protein | 1202 | 9e-130 |
| Q2HVG4 Alkaline phytoceramidase | 1184 | 1e-127 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G22330.1 ATCES1; catalytic/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1360 | 2e-150 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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