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Information for unigene UN20645
| FASTA Sequence |
| Unigene ID: UN20645 | Length: 2694 |
SSR | | GGATATAAAAAAAAAACTTTTGGATATGTGGTAAAATATGACGCCCCACCAATTGTATAAAATATACATGAATTTTGCTGTTTTTT
CTCATATACAAATTTCTTTCTGTGGTAACGACAACTGAAAACAAATATTTTCCTGTACAAGGAACAACTCGCCATGGAAACATATT
ATACCAAGATATATATAGAGAGAGAGAGAGAGAAAATAAGATTTTGGTTTCTTGTTGTTGGTAGTACTTACTTTGTAAGTTTGCGG
GGGTTTAGCCAAGGTAAGGCAACATCGGGTCCAAGCCTAGTCCTGAACCACCCAAGCTACCTGGGTCCGCATGTTTCACTCTTCCG
AAATAGCGTATGTGACGCAGTAGTCTTGCAAGGAACGTGTTGTGGCAGATTGTTGAGCTATCACATACCACCGCCACGTGCTTCCG
GGCTCTTGTTATGGCTACGTTCATCCTTCTGCTATCCCCTAGGAATCCCACTGCACCTAGGTTGTTGGACCGTACCATTGATATGA
TCACTGCATTAGCCTCACGTCCTTGAAAGCTGTCAATAGTTGCGACCTCAACTCCATCAGCCACTGGAAATTCATCGAGCCTTTCT
CTGGGAAGCTGCACCTGAGCAACATATGGGGATTGAACGGCTATAGCCATTTGACTAACCCCTGCATAAATCAACGAGATGACGTG
ATTAACCACAATATCTGCTTCTCCTTCATTGTATAATGAGCCTGTACCAGCTGGATCTAGACGCTCCTCGCAGCCCACTGACAAAC
TCCCATATGGCATTCTTGTGTCCAGGAGAAGCAGCGGGCATTGCGTTATCCAAGTAGGCTTCACAAAAGGAGAATCGATAAGCAGA
TGAGAGGCCACACTTGGAGACGATTTCAACCATCCACCATACATCTCCTTTGATGCCCAGCCAGCGATTACATCATTCATACGATA
CTGAGTTGATAACTTTGTGGCAAGAAGCCCATCATGTAAAGATGCAGCTCTTTCCAGTAAGGATACACCAAGCCCATCTTCTAAAG
CTTTACGTGATAAAACAACTGGTGCTAATTGGCATGGATCACCAGCAAGAATACAACGTTTCCCTTGCAATATTGGAATCCAGCAC
GAAGGCTCGATAGACTGACCAGCTTCATCTATAACAACCAAATCAAATGTATCCAACATCCTAATCAAAGGATCAGCTGATCCAAT
GTTAGTGGCGAAAACAACCTGTGCATTTGATAGTATTTCCTTCACAGTTTCTTTTTCCTTCTTCTTCAACGTCTTTCCAAGCTGTT
TCAAAAGCTGCCGAATGCCAGTAGCAAGAGAATCATCCCTCAGGCACTGCCGAAGATCTTTTCTTAAATCTGACTTTTTCCTTTCT
AATTCTGCTCGAAAGCTTGCGAGCTTGGAGTTCACAATTTCCCCCAAAGACTTTGAAGCAACAGCTGATGATATTCTTGCAGGGTT
TCCGACTCGGACAATGTTTAGGCCAAGATGTGAGAGCTTCTCGACCATGTTATCAACAGCTGCATTAGTAGGTGCTGTTACAAGTA
CTCTTTCTCCCTGCTGAACAGCTAAGGTGATGACCTCCTTAAGCATTCCAGTCTTTCCAGTGCCAGGAGGTCCTTGAACTATCATA
ACAGGTCTCTTTTTGTTTACTCCCAGCGCTATGGCTCTCCGTTGGGAATCGTCGAATAACTTTCCCACTGGCTCATCACTCAACTC
CGCTTCACTCCAGTCTACATAATCATTCTGCTCCAGCCATGTGATATCTTCCCCATCCCCAAATAATGTCGCCACTACAGAAATTG
ATGGATTTTTCTTCTGCAGCCCATTCTTCTGCAGAGGCATTAGGGCTTCACAGTTACGCTCATAAGTGAGAGCATCGGCCAACCCA
TGAATACGATCAATTCTCACACTCTTTCCAAAGAGCTTGGAGAAAGTAGGATCTCCATGACGAGATTCTAGAGCAACGCCAATGCT
GCAGCCATCATCTCCAAGGTTGTGAACAAACCCCTGCGTACAAGAAGTTGCTCCAGCACCCTTACTGTCACAAATTCTTATGCAAA
CCATGTCACCAGGGGAAAGTGTTGTAGGAGGTAGACGATGGTTGCCCCCAACCTTAAACAACACCAAGTGCATACCTCCCAGCCCT
GTGGAGGTACTGACTGCATACAAGTTGCATATCGTGTCACAAAGTTCCTGCGGAGCTTCACCGTGCCTAACCAAGAACTCGATCGG
TTTTGAGGAATCAGAGGTCTCATCAGGAGTAGGAATAACATCTAGCTCCTCTTGTGTAACCTCCAGTTCCGTATCTCGTTCCACTT
GAAGCAGCTGCGACATCCGGCTGGTGAACTCATCAATCCTTGCTTGTATAGCTTTTACCTTCTCTGAGTCCATACCAAAAACTCCA
GGAACTGGCTTTGGTTGATGAGCTTTCCGAGCAACCTCTCTGTGCTGAGCTGAATTAGCTATCTCCTTGAGTAGCTTCCAAGACTG
AGTCTCCTTCCAATTCTCCATGACGTTCTTGGTCTCAAGGTTTTGAAGAACATCACGCAGCTCTCGCTGGAAATGATCGAACAAGG
TGGGATAATGGGTGCAAGCCTTCAAACAGATGACTTCAAGGCCAAGTGGCATAGGAATGGCGTTGAGATAAGGCTGAGCCTGAATC
ACAAACGTCAGACCCGAACCGACGTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198446 putative DNA-binding protein [Arabidopsis thaliana] | 3963 | 0.0 |
| XP_002870460 hypothetical protein ARALYDRAFT_493645 [Arabidopsis lyrata subsp. lyrata] | 3962 | 0.0 |
| BAB09253 DNA helicase-like [Arabidopsis thaliana] | 3669 | 0.0 |
| XP_002264216 PREDICTED: hypothetical protein [Vitis vinifera] | 3476 | 0.0 |
| XP_002524012 DNA-binding protein smubp-2, putative [Ricinus communis] | 3463 | 0.0 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q60560 DNA-binding protein SMUBP-2 | 845 | 4e-089 |
| Q9EQN5 DNA-binding protein SMUBP-2 | 845 | 4e-089 |
| P38935 DNA-binding protein SMUBP-2 | 839 | 2e-088 |
| P40694 DNA-binding protein SMUBP-2 | 827 | 5e-087 |
| Q09820 Regulator of nonsense transcripts 1 homolog | 456 | 5e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FGC2 DNA helicase-like | 3669 | 0.0 |
| B9SDE3 DNA-binding protein smubp-2, putative | 3463 | 0.0 |
| B9I6S4 Predicted protein | 3369 | 0.0 |
| B9F204 Putative uncharacterized protein | 2936 | 0.0 |
| B8AH91 Putative uncharacterized protein | 2935 | 0.0 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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