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Information for unigene UN20650

FASTA Sequence
Unigene ID: UN20650Length: 976  SNP
CGGAGTCAAGATGCGTGTTCATTTTCTTTTAAAAATACTAAAAATACAACAAACGTAGTGGAAGTATAGTGCAAAAGGTCAATGAC
ACTAGAGAGAGTAATCATTTAAGAAATTAACAAACATATTTATATACTAGCATACTGTATATTAATTATTGTAGAAAGCAACGTTT
AAAGCATGTCGTGGTTCCAAGGGAATGGAGATAAGCCAAACGCAAAACGAACGTTGATGTATTGGAAGGTGAAATGGTCATTTGGT
TTCAAGTCCCAATCAGCAAGAGATAAGAGTTTCGTTTAGGCTGATGTCGGGAAGTAAGGAGATGTTGATACTAATCTCTCTTTGCG
CTTCTCAAGAAACCTTTGCAGTGACTTTGTCCTTTGGATGGGAAGATCTCCTTCTAGATTCTGGCCAAAGAGCTTTGTCCTTATGG
TGGTCGGAGGAATTACCGAATGATTTTTCACAATCGATTTGTCTTTCTTTGGTGCTGTTTCCATGACAACCTTCAGAATATCATCA
GCCTTGTTAGGAGACACTTGGTAAACGGAGACGGTTCCATTGTAGAAGATGGTCATAGGAACAGTTCCAGAGACGAGTTCCGTAGG
CATGTTGAGAGGCGCTTGGACCGGAGAAATAGGGATCTGAGGATGATCTGCCTTTGGAGTAGACGGAACCGAAGGAGATATAGTCG
ATGAATCTGCATGGTCAGCACCAGAAGCTAACAATGATTTGATAATCTCCGGATTGATCTTAGAAATGGCACCTTGAATATCTCGG
AAACTGCGACGACGGTCGAGAAATTTCTTGAACTTAGGCTTTGGAATGTTGTTGGTCTGCTTCTTCTCAAGACCGAAGAAGTCGAG
CTCTGTGGTAACTCTAGACATCTTTGATCTGATCTTTCTTGCTAGCTAAAACAGAGATGGAGAGGAAAGAGAGAAATGAAGGATAT
GTTTTTTTAGATGGAGAGGCTTGAGAGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871554 hypothetical protein ARALYDRAFT_488138 [Arabidopsis lyrata subsp. lyrata]7413e-076
NP_568287 protein TIFY 9 [Arabidopsis thaliana]7181e-073
CAB86629 putative protein [Arabidopsis thaliana]6642e-067
NP_974775 protein TIFY 9 [Arabidopsis thaliana]6607e-067
NP_001154713 protein TIFY 9 [Arabidopsis thaliana]5102e-049

Swiss-Prot top hits (Blast detail)Scoree value
Q93ZM9 Protein TIFY 97186e-075

TrEMBL top hits (Blast detail)Scoree value
C0JPT8 JAZ10 variant 45101e-049
B9GZA6 Predicted protein3999e-037
A5ADJ0 Putative uncharacterized protein3934e-036
B9GMR3 Predicted protein3828e-035
B9RFX5 Putative uncharacterized protein2537e-020

Arabidopsis top hits (Blast detail)Scoree value
AT5G13220.1 JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)7194e-076
AT5G13220.2 JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)6603e-069
AT5G13220.3 JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)6603e-069
AT5G13220.4 JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)5107e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  38%
 
82  25%
 
92  25%
 
71  13%

Unigene MembersMember information