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Information for unigene UN20663
| FASTA Sequence |
| Unigene ID: UN20663 | Length: 833 |
SSR | | ATCATGGCTTCCTCTGCTGCTGCTGCATCGATCTCTCTTGTAACTCTAAGGAACATCTCTCGCAAACACCAAAACCCTCTTTTGGG
TTTCTCAACTTCCTTCCATAACCTAAGGATCTCATCCAACGGTCCAGCTTTCTCCACACGATCAAGATCCACCACCTACTCATCCA
CTCCAGCTTTCTTCAGAACCATGTGCAGCAGCAGCAGCAGCGAGAACTCCAGACCCACTAAGATCCAAGAACTCAACGTGTACGAG
TTCAACGAAGGCGACCGAAACAGCCCAGCGGTTCTAAAACTCGGCAAGAACCCACAGCAGCTCTGCATCGGCGACCTCGTCCCTTT
CACGAACAAACTCTACACCGGAGACCTCAAGAAACGCGTCGGGATCCCGGCGACTCTGCGTTTTGATCCAGCACGTTCCCGAGAAG
AAAGGCGACCGCTTCGAAGCTTCTTACAGCTTCCACTTCGGAGAGTACGGTCACATTTCCGTTCAGGGACCTTACCTGACTTACGA
GGACACGTTCCTCGCCATCACCGGTGGCTCCGGAGTCTTCGAAGGTGCCTACGGACAGGTCCAACTTCGTCAGCTTGTGTATCCGA
CCAAGCTGTTCTACACTTTTTACTTGAAAGGTGTTGCCTCTGATTTGCCTGTGGAGCTCACCGGAAAACATGTTGAGCCGTCGAAG
ATGTGAAGCCGGCGGCGGAAGCTCAGCGGCTCAGCACGGCGCGACTATCCTTTACTTTACCGAGTAAAATCATTTGCGGCGTTGAG
CTTTCTCTGTTGTTTTCTCTGGATCTGATGGGTCTATATGGGCCTAAATAATGGGCTTT
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| GenBank top hits (Blast detail) | Score | e value |
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| ABV89668 ERD12 protein [Brassica rapa] | 531 | 5e-052 |
| NP_172786 allene oxide cyclase [Arabidopsis thaliana] | 500 | 2e-048 |
| AAG09557 Unknown Protein [Arabidopsis thaliana] | 500 | 2e-048 |
| XP_002889998 hypothetical protein ARALYDRAFT_334627 [Arabidopsis lyrata subsp. lyrata] | 481 | 3e-046 |
| NP_566777 allene oxide cyclase 3 [Arabidopsis thaliana] | 455 | 3e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93ZC5 Allene oxide cyclase 4, chloroplastic | 505 | 2e-050 |
| Q9LS01 Allene oxide cyclase 3, chloroplastic | 455 | 1e-044 |
| Q9LS02 Allene oxide cyclase 2, chloroplastic | 445 | 2e-043 |
| Q9LS03 Allene oxide cyclase 1, chloroplastic | 438 | 1e-042 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8IXX4 ERD12 protein | 531 | 3e-052 |
| Q0WP37 Putative uncharacterized protein At3g25780 | 455 | 2e-043 |
| D1GC07 Allene oxidase cyclase | 444 | 4e-042 |
| D1GC08 Allene oxidase cyclase | 444 | 4e-042 |
| D1GC09 Allene oxidase cyclase | 444 | 4e-042 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G13280.1 AOC4 (ALLENE OXIDE CYCLASE 4); allene-oxide cyclase | 505 | 2e-051 |
| AT3G25780.1 AOC3 (ALLENE OXIDE CYCLASE 3); allene-oxide cyclase | 455 | 1e-045 |
| AT3G25770.1 AOC2 (ALLENE OXIDE CYCLASE 2); allene-oxide cyclase | 445 | 2e-044 |
| AT3G25760.1 AOC1 (ALLENE OXIDE CYCLASE 1); allene-oxide cyclase | 438 | 1e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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