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Information for unigene UN20675
| FASTA Sequence |
| Unigene ID: UN20675 | Length: 1221 |
SSR | | GGTGGTATCACATCGAAGCGATTAAGCTCGAGGAGTCGAAAATCCCTGAAGTTGCTGGGTTCAAGTGTTGCAAATGCCGTCGTATA
CGGTCACCAGAATGCCCTTACATGGATCCTGTACTCAAGGAACAGAAACAGATGAAAAACGTATCCTTCAAGCGCAAGAAACATGG
GAAAGGAAATACAGGAATGGATTCTGATTCTGAACCAAAAGACTCCATACCCTCTACTCCTTCGTTTACCTCCGAAGATGCGTTTG
TTCCAGAGGATGATCCTCTCTTGGTGTCAGTTTCAAAAGTCGAGCAGATCACACCTAAGGATTTGGATGTGGAATGGAAAGGAGAT
GGTTCTGTGCCGAGACCTCAGAAGTTACCAGTTAGGAGGCAAATGAAACGTGAGACACAACAGAAGGGAACAGTAATCTTTCTTAT
ACCGAGTTTTCAACATATTCTGAGTCACATCCTTTTGTGAAACCAGAAATGGAGCCAACGTTGCCTGCCATGGATTGGGATGCATC
TGACAACAACAACAACAAGATGGTTGAAGGAGAGCTAATGTTTGACTACGAAGACATGGAATTTGAACCTCAAACCTATTTTTCAC
TGACCGAGTTACTTACAACAGATGATGATGATGGCCAGTGCAATGGATATGGCTATGACAAAGATGCGACAGGGAACACGGATAAC
ACAAACCCAAACACTCAGGTTGAGACAATGGAACAGTGCAGAGAATTTCTCTATGACGATACAACTCCATGTCAGATATGTATGCA
TGTGGAGCCAGGGCCTGATCTCACGTGCCACACTTGTAATATGACAATACATTCCCATTGCTCTCCATGGGAGGAGGAATATGATT
GCGCCGGAGGTAGCTGGAGATGCGGTCGTTGCCGTCAGTGGATGTAGCTTTTGCGTAAGTTTAAGTCACCACTTAAAATTCTTCTT
GTTTTTGTTTCTTAGTTTCTGGCTAAAGGCTAGGCCCCATGTGCTGCTTCTTGTAGGGTTTTTTTTGACGAATACAAAGAATGCGT
GCGTTGTCAAAAGAAGTAAATTAAATTCAGATGAAAGTAACTAGTTCTCTTTGCAGTGGTATATAACAAGCTCATATTCTTTTATT
GTTGCTTGTCCCTGCCTTGTGCTGCAAAAGAGTGTCTGTACATCTTTCTGCTTGGGATTGAGACGATGTTTTACACGTTAATGCTT
CCCAACATATTATGAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB11682 unnamed protein product [Arabidopsis thaliana] | 723 | 5e-074 |
| NP_197668 PHD finger family protein [Arabidopsis thaliana] | 723 | 5e-074 |
| XP_002872016 PHD finger family protein [Arabidopsis lyrata subsp. lyrata] | 719 | 1e-073 |
| BAA98208 unnamed protein product [Arabidopsis thaliana] | 477 | 2e-045 |
| NP_851094 DNA binding and zinc-finger domain-containing protein [Arabidopsis thaliana] | 477 | 2e-045 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FNI5 Gb|AAC80581.1 | 723 | 3e-074 |
| Q3E8P3 Putative uncharacterized protein At5g35210.1 | 477 | 1e-045 |
| Q9LHR7 Genomic DNA, chromosome 5, TAC clone:K3D20 | 477 | 1e-045 |
| Q56XE1 Putative uncharacterized protein At5g35210 | 345 | 2e-030 |
| B9SN69 DNA binding protein, putative | 303 | 2e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G22760.1 PHD finger family protein | 724 | 1e-076 |
| AT5G35210.1 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein | 477 | 6e-048 |
| AT5G35210.2 peptidase M50 family protein / sterol-regulatory element binding protein (SREBP) site 2 protease family protein | 477 | 6e-048 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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