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Information for unigene UN20678

FASTA Sequence
Unigene ID: UN20678Length: 1203 SSR 
GGAGAGTCCGCTTGGGGAAGGTAGTAAGTAGCTCAACAGAAGAAGAAGAAGAGTCGTCGTCGGCGAAAAGTCTCATCTCATCTCAC
CGCCACTCGAATCTCTGTCCTGAAGTCCACCGCCATTTCACTAGCGATGGGAGACGAGAAGCCGACGGTTGTGATGGCCAATCGAG
AAAGAGACCTGGAGCTTCTGATGCCCGTCGCTGATTCCAAAGATAAAGATGAAGGTTCTAGTTCGAAGCCTTCTTCATCTTCTTCT
TCGCAGCATCAAGCTAGCCACGAGACTTTAAGCTTGTTCATTAGGGGTTGGGCCTCTAAGAAGTTCATGACTGGCTGTGTTATCCT
CCTTCCCATTGCCATTACATTCTACATAACATGGTGGTTTATTCACTTTGTTGATGGTTTCTTCTCTCCCATTTATGTTCAACTTG
GAATCAACATTTTTGGTTTCGGTTTCTTGACTTCAATCGCGTTCATCTTCTTGGTCGGAGTGTTCATGTCTTCATGGTTGGGGGCT
TCGGTTCTGAACTTGGGAGAGTGGTTTATCAAGCGGATGCCATTTGTTCGCCACATCTACAACGCCTCCAAGCAAATCAGTACTGC
CATTTCACCAGATCAAAACACGCAGGCTTTCAAAGAAGTCGCCATCATAAGACATCCACGTATTGGTGAATACGCTATTGGGTTTA
TCACGTCCACCCTTGTTCTCCAGACTTACTCGGATGAAGAGGAACTTTGCTGTGTATATGTTCCGACAAATCACCTTTACATCGGG
GATGTGTTCCTTGTAAGTACAAAGGATGTGATCAGACCAAATCTCTCAGTTAGGGAAGGCATAGAGATCGTAGTGTCAGGAGGAAT
GTCAATGCCGCAAGTTTTGTCAACACTTGATATGAGATTGCCTTCAGAAAGAAGTAGAAGTACTAGAGTTGAAAGAAACTGAAGAT
TAGTCCTTTGCAGAAAACAAACCGATTCTCAAATTTTTTCTTTTTTTTTCGTGTCTTCTCCTGTTGGATTCAGTTAATTTCACATT
TGATGTTAAAGCATTAGAAAGCATTGGTGTTTTAGTTGTTCCCGAGACGAAGTCCATTTGTGCTAACACTGTTTCTGTCTATATCA
TAGATTTTGCTACACCTCCAAGTTAGCTGTAAAATGTATTTATTTCCTTTAAAGGCATCTCATGAACATGGTGTTCCTTTGATTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAF02116 hypothetical protein [Arabidopsis thaliana]12191e-131
AAD24385 expressed protein [Arabidopsis thaliana]12111e-130
NP_565464 uncharacterized protein [Arabidopsis thaliana]12092e-130
AAK95310 At2g20120/T2G17.8 [Arabidopsis thaliana]12031e-129
XP_002883944 hypothetical protein ARALYDRAFT_480456 [Arabidopsis lyrata subsp. lyrata]11993e-129

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q0WL91 Putative uncharacterized protein At2g2012012191e-131
Q9SL69 Expressed protein12118e-131
Q94EH1 At2g20120/T2G17.812037e-130
Q8VY49 Expressed protein11526e-124
B9ILN4 Predicted protein10971e-117

Arabidopsis top hits (Blast detail)Scoree value
AT2G20120.1 COV1 (CONTINUOUS VASCULAR RING)12098e-133
AT2G20130.1 LCV1 (LIKE COV 1)11523e-126
AT2G18460.2 LCV3 (like cov 3)9176e-099
AT2G18460.1 LCV3 (like cov 3)8665e-093
AT1G43130.1 LCV2 (LIKE COV 2)8307e-089

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  33%
 
71  33%
 
61  33%

Unigene MembersMember information