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Information for unigene UN20684

FASTA Sequence
Unigene ID: UN20684Length: 872  SNP
AGGACACCACAAAGTCATTTAAGCTTTTAAATACAAACAAAATCCCCAACAGAAAAGGGGCAGAAAAAAAAGTGTGAAAGACTAAA
AATGAAGGGTTTCTACTTTCACCTCTTCCTAGTAACCATGACGGTCGTTGCCTCCATCTCCGCTGCTACACCGGCGGCTCCGGCGG
GAGGAGGATCTTTGTTAGACGAATGTAGCAAAGATATTCAAACGGTGACTTTGTGTTTGGATTTCGCGACAGGGAAGGCACCAAAT
CCATCTAAGAAGTGTTGTGACGCTATCGAAGGAATAAAAGAGAAAGATCCAAAGTGTTTGTGTTTCTTGATTCAACAAGCCAAGTC
AGGAGGACAAGCTTTTAAGGATCTTGGTATTCAAGAAGCCAAACTCATTCAACTTCCAACTTCTTGTCAGCTCCACAACGCTAGCA
TCTCCAACTGTCCAAAACTCCTCGGGATTTTGCCAAGCTCACCAGAGGCAGCCGTATTCACAACAAGCAATGCCACCTCAACAACA
CCTTCTGCACCGGGAGGAACGTCTCCAGCAACTCCAGCGATGTCTAGCGAGAAAGCAGGATCAGCTTCCATAAAAGATGGCCACGC
CGTAATGGCTCTAGCCGTCGCTTCGATGACCGTCTCCTTCCTCTCGACCTTGCCTTGGATGGGTTTGGCCTAGACGGTAGGCACGT
GATATTAGGGGATGTAATCTTTCTTTCTTTATTGTGTGGAGCTTTTGTCTCAAAATTTTAAGACTTATCTTGTCGAGTGTGTTTCT
TGCTTCGGACCATTTGTTGTAATGAATGAACTTTCCCGCTTAATCTTTATCTCTTTCCACACATAACTAAAGTTTTATATTACAAC
CTAAGCTCAAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890752 hypothetical protein ARALYDRAFT_890328 [Arabidopsis lyrata subsp. lyrata]7842e-081
AAM62634 lipid transfer protein, putative [Arabidopsis thaliana]7252e-074
NP_174116 glycosylphosphatidylinositol-anchored lipid protein transfer 1 [Arabidopsis thaliana]7224e-074
ABI81469 lipid transfer protein-like protein [Noccaea caerulescens]4232e-039
XP_002303794 predicted protein [Populus trichocarpa]3972e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q9C7F7 Uncharacterized GPI-anchored protein At1g279507321e-076

TrEMBL top hits (Blast detail)Scoree value
Q06AI8 Lipid transfer protein-like protein (Fragment)4231e-039
B9GZQ5 Predicted protein3971e-036
C6SWC4 Putative uncharacterized protein3925e-036
C6SWF2 Putative uncharacterized protein3916e-036
B9RMD9 Non-specific lipid-transfer protein3827e-035

Arabidopsis top hits (Blast detail)Scoree value
AT1G27950.1 LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1)7321e-077
AT2G44290.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (YLS3)2032e-016
AT2G44300.1 lipid transfer protein-related1801e-013
AT1G36150.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein1234e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  7%
 
128  29%
 
62  7%
 
1014  50%
 
112  7%

Unigene MembersMember information