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Information for unigene UN20688
| FASTA Sequence |
| Unigene ID: UN20688 | Length: 1107 |
SSR | | GGAGAGAAGCTGGAAAGAAGGTTCTAGGGGGAAGAAGAGTTTGTTCGGTGCTCTCTCTCTCTCTCAATAAACTTGGCTTCTTGTTC
TTCATCTTCTCTGCTTCTGAATCGATCCGATCTTGACGAACATGTCTTCTCCTGGCGAATACTACAACTCACTTCCTCCAATAACC
AAGGCTTATGGTACTTTGTGCCTCCTGGCTACAACTCTATCTCAGCTTGGCTTAGTTGCTCCTATTCACATTGCTTTGATTCCTGA
ACTTGTCTTTAAGCACTTCCAGGTTTGGAGGCTGATAACGAACTTGTTTTTCCTTGGAGGGTTCTCTATTAATTTCGGGATACGTC
TTTTGATGATAGCAAGGTATGGAGTTCTACTCGAGAAAGGGCCTTTTGAAAGGCGGACAGCAGACTTTTTGTGGATGATGATCTTT
GGATCCCTGACTCTCTTGGTTTTATCAACCATACCGTTTTTCTGGACACCATTCCTTGGAGTTTCACTTGTGTTCATGCTTCTGTA
TCTCTGGAGCCGAGAGTTTCCAAATGCCAACATCAGCCTGTACGGTCTTGTCAATCTTAAGGCTTTCTACCTCCCATGGGCAATGC
TAGCACTTGACGTTATCTTCGGTTCTAAGATCATGCCAGATCTTCTTGGCATCATAGCTGGACATCTTTACTACTTCCTAACAGTC
CTTCACCCTCTCGCCACCGGAAAGAACTACCTGAAAACCCCTAAATGGGTTAATAAACTGGTGGCAAGATTTCGAATTGGAGCTCC
AGTAGCAGCTGTTCGTCAAGCAGGTGGTGTAGGAGCAGTAGGATCCGGAACTGGAGGAGGAGCTTATTCAAGCGCTCGTGCCCCAC
CAGAGAGCTCCACCAACACAGCATTCAGAGGTCGATCATATCGTCTCACCGACTGAACTCTCCGATTCCTTCGTTTTTCAATCATC
CCGTATGTTTTGAAAAGAATGCCACTGACAAGTAGCAGTTAGCTTTATGTGTTTTATTAAGCAGGTACAGTTTTTGAGTATACGAC
TTTGTAGGGGGAAAGAAATCTTTTGAGGGTTTTTTTTTAAAACAATGTTGTGTTCAGAATACTTAGTGCCCTTTT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_194662 derlin-1 [Arabidopsis thaliana] | 1234 | 2e-133 |
| XP_002869440 hypothetical protein ARALYDRAFT_491823 [Arabidopsis lyrata subsp. lyrata] | 1226 | 2e-132 |
| CAB79691 putative protein [Arabidopsis thaliana] | 1205 | 5e-130 |
| XP_002275238 PREDICTED: hypothetical protein [Vitis vinifera] | 969 | 1e-102 |
| XP_002309232 predicted protein [Populus trichocarpa] | 908 | 1e-095 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9H8Y1 Predicted protein | 908 | 1e-095 |
| B9RKF3 Derlin-3, putative | 892 | 7e-094 |
| Q6PW25 Putative Der1-like family protein | 856 | 1e-089 |
| B7FA80 Putative uncharacterized protein | 848 | 9e-089 |
| B8AYW3 Putative uncharacterized protein | 848 | 9e-089 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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