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Information for unigene UN20689

FASTA Sequence
Unigene ID: UN20689Length: 1362 SSR 
GTGATATCCAAGGTCAAGTTAAGGCAATGGGGGCTGGCTTGGACGGAGTGAAGAAGGAGAGGCAAGCAATTTCAGCAAGGATTAAT
CAGCTGAGTGAGAAGGTGAAAGCAGCTAAAGACGAGATTCAGGTGCTGGAGAATGAGCTGAAGACTGTGACTGAGAAGAGAGACAA
AGCTTACGCAAACATTCGTGAGCTTAGGAAGCAAAGAGATGAGACGAACTCTGGATTTTACCAAGGGCGTAATGTGTTGAACAAAG
CTAGAGACTTGGCTGCACAGAAGAACATAGAGGAGCTCGAGGCGCTCTCCAATGCAGAGGTTGAGAAATTCATCTCCCTCTGGTGC
AGTAAGAAGAATTTCAGAGAGGATTACGAGAAGAGACTCTTGCCATCGCTTGATGCTAGGCAGCTTAGCCGAGATGGACGGATGAG
GAACCCTGAGGAGAAGCCTCTGATTGCTCCAGAGGCATCACAAGCAAAGGCGGCAGCGCCTTCTCAAATCGAGGTTGTCCCTAAAG
CTAAGGCAAAGCAGCAGCAGCAGCAGCAGCCAAAGGAGGAACCAGTGTCTGCACCTAAACCAGAAGCTACTGTTCAGAAGACTGAG
AAGAAAGCTAAAGATGCGGCGAAAGTAAAGAATGTTGTTGTTGCTGATGAAGAGGATGATGAAGTATATGGTCTTGGAAAGCCGCA
GGAGGAGAAGAAGGTAGATGAAGCGGCGTTGAGAGAGATGAGAAAGCAAGAGGAGATTGCTAAAGCCAAGCAAGCCATGGAAAGGA
AAAAGAAGCTGACAGAGAAAGCTGCTGCTAAAGCTGCTAAAAGAGCTCAACTGGAAGCTGAGAAGAAAGAGAAAAAGGAGAGAGAG
AAGAAGGCCAAGAAGAAGGGAGGCGAGACCGTCTCTGAGGAAGTTCCTGAAGCTTCTGAGGCTGAGAAGGAGGAGATTGAAGCACC
AGTGGAGGAGAAACCATTGAAGGAGAAACCAGTGGGGAACAGGATCCGCACTAGAGGAGGACCAGAAACACTCCCGAGAGCTATCC
TCAAGCGTAAGAAGGCGACTAACTACTGGATTTATGCTGCCCCAGCCGCTCTTGTGGCACTGATGCTTCTTTTCTTGGGTTACTAC
TACGTTCTCTAGATGAAAACGTAGTGATCAAGCGAGGCCTGCGTTTTGTTGTAGTTTGGGATAATCTTTAAAAGCTTCTTTTTGAG
GATGAGACTCTTTAAGCTTATACCTCCTTTACATACAGAGTAGCGACTCCTCCCTTTATAAGTACTTTCACATTTCACTTCTTTGT
TCTTTTCTCTTTTGTTGTTGAGGGCTTTTAACTTTGAAGTATTAAAAACAGTTTTTGTTACATTTTATAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194480 proton pump interactor 1 [Arabidopsis thaliana]14271e-155
CAB43882 proton pump interactor [Arabidopsis thaliana]14271e-155
XP_002869559 hypothetical protein ARALYDRAFT_328945 [Arabidopsis lyrata subsp. lyrata]13705e-149
BAH19433 AT4G27500 [Arabidopsis thaliana]10686e-114
XP_002329130 predicted protein [Populus trichocarpa]8921e-093

Swiss-Prot top hits (Blast detail)Scoree value
P12957 Caldesmon1802e-012
P19934 Protein tolA1642e-010
Q08695 Axoneme-associated protein mst101(1)1524e-009
A5E4P1 Protein PXR11507e-009
P36044 Protein MNN41417e-008

TrEMBL top hits (Blast detail)Scoree value
O23144 AT4g27500/F27G19_10014279e-156
Q9SZS5 Proton pump interactor14279e-156
B9DFB6 AT4G27500 protein (Fragment)10684e-114
B9N1G2 Predicted protein8921e-093
B9HZV0 Predicted protein8703e-091

Arabidopsis top hits (Blast detail)Scoree value
AT4G27500.1 PPI1 (PROTON PUMP INTERACTOR 1); protein binding14284e-158
AT3G15340.1 PPI2 (proton pump interactor 2); protein binding5512e-056
AT3G15340.2 PPI2 (proton pump interactor 2); protein binding5512e-056
AT5G36780.1 AT5G36780 and AT5G36690 represent identical copies. The duplication within clone F27C7 is believed an artifact with only one true copy existing.3872e-037
AT5G36690.1 AT5G36690 and AT5G36780 represent identical copies. The duplication within clone F27C7 is believed an artifact with only one true copy existing.3872e-037

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
118  89%
 
101  11%

Unigene MembersMember information