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Information for unigene UN20695

FASTA Sequence
Unigene ID: UN20695Length: 801 SSRSNP
GGGAGTCCAATAATATATATAAAGGAAGCCACCAGATAAAACTTAGGATAAACCATAGCCTAACATTTTACCACCCACCAAAAAAC
AGAGAGAGAGATGAGAGGGCATGAGCCACGGTCAAGCTCCTCTTGTGCAGCTTGCAAGCTCTTGAAGAGAAGATGCACACCCACTT
GCATCTTCGCTCCTCATTTCCGCTCGACCGACCAGATGACTTTCGCCAAAGTCCATAAAGTCTTTGGAGCCAGCAACGTCAGTAAG
CTTCTCAGCGAGGTTCCCGAAGAACAGAGACAAGAAACCGTCAACTCCTTGGCTTACGAAGCTGACGTCCGTCTCAAGGATCCTGT
TTACGGTTGTATTGGAGCCATAGCTTCTCTGCAGAAGAAGATGCTTGAGCTTCAACATGATATAGCCGTTGCTCGCAGTCGACTAC
TTAGTGCCCATAATAATGCTGGTGGTGGTGGTGTCAACAACAACAACAACAGCAACCACGTGTCGTCGTCCCCTTTGGTAGATGAT
TCTTCTCCTCAGCTTGCTGCTTTTCTTGATCTTGTACCTTCTTATAGTGACTTGATGTTGCTTGATGGGTCTGGTCTTGATGCTTA
CTTGTTTGATATTGGACAGCCTCCTTTTGTATAGGCCTCTCTTTATCTCTTTTATCCACTGTATTTGCACTTGCTAATAAGTCATC
TTCACTAATGTATTATTAATCCTAATATGCAAAATCATTTGCTTACTTCTATCATTTGTATAAAAGCTCAGATTAAATTTCAAAAA
TCTTAACGCAAAACGAGAAGACTAAGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187720 LOB domain-containing protein 21 [Arabidopsis thaliana]5503e-054
XP_002882715 LOB domain family protein [Arabidopsis lyrata subsp. lyrata]5422e-053
ACU13259 unknown [Glycine max]4841e-046
XP_002272821 PREDICTED: hypothetical protein [Vitis vinifera]4822e-046
ACJ84597 unknown [Medicago truncatula]4714e-045

Swiss-Prot top hits (Blast detail)Scoree value
Q9SRL8 LOB domain-containing protein 215501e-055
O04479 LOB domain-containing protein 63332e-030
Q8L8Q3 LOB domain-containing protein 253295e-030
Q8LBW3 LOB domain-containing protein 123279e-030
Q8L5T5 LOB domain-containing protein 153242e-029

TrEMBL top hits (Blast detail)Scoree value
C6SVI6 Putative uncharacterized protein4849e-047
B7FIL8 Putative uncharacterized protein4713e-045
A9P9I7 Putative uncharacterized protein4516e-043
B9HHT6 Predicted protein (Fragment)4516e-043
B9SQQ2 LOB domain-containing protein, putative4481e-042

Arabidopsis top hits (Blast detail)Scoree value
AT3G11090.1 LBD21 (LOB DOMAIN-CONTAINING PROTEIN 21)5501e-056
AT1G65620.1 AS2 (ASYMMETRIC LEAVES 2); protein binding3332e-031
AT1G65620.2 AS2 (ASYMMETRIC LEAVES 2); protein binding3332e-031
AT1G65620.3 AS2 (ASYMMETRIC LEAVES 2); protein binding3332e-031
AT1G65620.4 AS2 (ASYMMETRIC LEAVES 2); protein binding3332e-031

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  22%
 
93  33%
 
84  44%

Unigene MembersMember information