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Information for unigene UN20706

FASTA Sequence
Unigene ID: UN20706Length: 1391 SSR 
CCAGTAACTGAAAACTGAAAATGAACCTAAAAAGAGCCGCTTGGTAACTTAGTTTAAAGGATCACAAATAAGTCTACTAGAAAAGT
AAAGCGTTATCTAAAAGATAATTAAGCCTCAAAATGATTTTCCTTTGTAAGAAGGAAATCAGAAGAAATGAATTTGGCAGTATGAT
GAAGCTTTGGGAAGCTTAGTAAGAGCACTGGTGATTCTCTTGTAGTTATTGTTAACATTGTCGTCTTCTCCGTGATTCTCAGCTTT
GACACCAACCTTGACGGTTTCAAGACATTTCAAATATCCCAGGAAATGTCTCATCTGTCTAAGCTCTCTACGACTTCCTCCATACC
CGGAAATGTTTAGAACCTTCACTTGACATGTAGATAAGCAGCATACTTCTTCCTCCATCTTCTTCTTCTTTCTTTTAGCAATGCAA
ATACAGGCATCCCCGCATCTATCTGTAACTTTGTGCAAAAGCCCCTTGATGACTAGGGTTTCAAGGTTTGGAGAGTTGTTGAGGAG
AAGTGGCAACACTTGCCAGCCTCTTTCTTTGTCACTCTCAAGTGATAAGGTAAGGAGGTTGTGAAAGACCGGTATTGATTTGCAGT
ATAAGTGAAACACCTCAAGCGTATACGAAGACAGGCGAAGGGTTTTAACATTGCTTATCCCTGCAACCAGATCCGTAACATCAGGC
CGTAAAATATCATCTGGATCCTCCTCAACATCCTCATCAACAACAAGAACCTCAATATCATCGTCCTCACCAAAACCACCATCTTC
ATCATCATCATCATCATCATCATCATCATCATCATCTTCATCAATTCTCTTACAACTCAGAAGATGGAGAAAAACTGCGACTTGGA
ACTTCGTCTCTTTCCAACATCCTCTTATGATACCGATTCAGACACCTCTGTGGTAGAATCAAGAAGCTCTGGAAATTCACTACCAA
AGGAAGAAGAATCTCAGAGGATTACAATTTTCTACAATGGAAAAATGTGTGTTTCTTCGAATGTTACCAATCTTCGGGCTAAATCT
ATAATATCGATCGCGAGTAGAGAAATGGAAGAAAGGTCATCCTCAAACGGGTCGGATCCTCGGAACAGGTTGACCCGATTACATCA
TCATCAGCTTCCGAATCCAAAGGCTTCAATGAAAAGATCTCTCCAAAGTTTTCTTCAGAAACGGCGGATGCGAATTCAAGCCACTT
CACCTTACCATCAGCATTCACGCCGATAGTGTTTTTATTTTGTTTTTCACTTTTTATTTGACATCGCTTAGCAGTTTTGTGTTTAG
TATGTGTGATCCAAAAGTAAATTCAACTATGTTATATTTCTCATGTGCGCTTGGTCCTGATTAGGGATGTACTCCCAACACAAACA
CACATTTAATCCCAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175273 F-box/RNI-like/FBD-like domain-containing protein [Arabidopsis thaliana]6456e-065
NP_180554 F-box/LRR-repeat protein [Arabidopsis thaliana]6359e-064
AAO86841 hypothetical protein [Arabidopsis thaliana]6359e-064
NP_973562 F-box/LRR-repeat protein [Arabidopsis thaliana]6359e-064
AAC31859 unknown protein [Arabidopsis thaliana]6359e-064

Swiss-Prot top hits (Blast detail)Scoree value
Q84RK6 F-box/LRR-repeat protein At2g299306354e-065
Q56XW8 F-box/LRR-repeat protein At1g484006051e-061
Q9LM64 Putative F-box protein At1g219905701e-057
P0C2F8 Putative F-box protein At1g645404983e-049
Q8LBM2 Protein TIFY 5A4804e-047

TrEMBL top hits (Blast detail)Scoree value
Q1PFM5 Syntaxin-like family protein3337e-029
Q9C696 Putative uncharacterized protein T6B12.53337e-029
Q9LXR3 Putative uncharacterized protein T20N10_2403122e-026
Q9LX44 Putative uncharacterized protein F25L23_1302082e-014
Q9LX53 Putative uncharacterized protein2055e-014

Arabidopsis top hits (Blast detail)Scoree value
AT1G48400.1 F-box family protein6452e-067
AT2G29930.2 F-box family protein6363e-066
AT2G29930.1 F-box family protein6363e-066
AT2G29930.3 F-box family protein6363e-066
AT1G21990.1 F-box family protein5772e-059

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  20%
 
62  40%
 
92  40%

Unigene MembersMember information