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Information for unigene UN20713
| FASTA Sequence |
| Unigene ID: UN20713 | Length: 803 |
SSR | | AGCCCACGCCGAATACCATTTTTTTAATCACACAATAATAGTTCTTTTAGTGGTCACGTTTCTAGAACTTTGGAACTCTCTCTCTC
TCAGGACATGGTGGATTTCTAAACTCGATGATGACAGAGAGTGATAATAAAAAAACAAGAAAACACAGTACAAACTTTGTAATAGG
TGAAAACGAATAGGGCTTGGTTCAGCTCTGCGGCAGCGGCATTCTGACTTATTAAGCAGCAAGTGGATTGGCGTGGATTGTCACAC
GGTTTAGCCTTATCTCAGCAAGCGGCCTATCTCCCGCACCTGTTTGAGTCTTTTCCATAATGTCAAGCACTTCGAAGCCATGGATG
ACTTTGCCAAAGATGGTGTATAATCCATTGAGATGAGGTTGTTTGGCATAGGTAAGGAAGAACTGGCTTCCATTTGTGTTTGGGCC
ACTGTTTGCCATCGACAGCATCCCTCTTGCATTGTGCTTAAGGGAGTCACGAATCTCGTCATTGAATTTCTTTCCCCAGATGCTAG
TTCCTCCTTTCCCTGTACCGGTTGGGTCTCCGCCTTGGATCATGAAGCCTTTGATGTTCCTGTGAAAGATAGTCCCATCGTAATAG
CCACTTGCACATAGCGCCAGAAAGTTCTCGGCACTCTTTGGAACCTCGTCACAGAAGATCTCGCACTTTATATCCCCCAGATTCGT
GTGCAATGTTATTGACATCGACGCTGTGATGCTTGGAAACTAGCGGAGCTGAGTTGATTTCCTACCTCTTCCTTCTCTCGCGTCTA
TGCTTTGTTTTTGTTCCAGATTTTTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892036 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis lyrata subsp. lyrata] | 837 | 1e-087 |
| NP_171696 peptidyl-prolyl cis-trans isomerase-like 3 [Arabidopsis thaliana] | 836 | 2e-087 |
| ACU14660 unknown [Glycine max] | 825 | 4e-086 |
| XP_002511738 cyclophilin-10, putative [Ricinus communis] | 820 | 1e-085 |
| CBI38786 unnamed protein product [Vitis vinifera] | 820 | 1e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5KHA8 Peptidyl-prolyl cis-trans isomerase-like 3 | 628 | 1e-064 |
| Q54E95 Peptidyl-prolyl cis-trans isomerase-like 3 | 599 | 3e-061 |
| Q9H2H8 Peptidyl-prolyl cis-trans isomerase-like 3 | 589 | 4e-060 |
| Q812D3 Peptidyl-prolyl cis-trans isomerase-like 3 | 589 | 4e-060 |
| Q9D6L8 Peptidyl-prolyl cis-trans isomerase-like 3 | 583 | 2e-059 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LPC7 Peptidyl-prolyl cis-trans isomerase | 836 | 1e-087 |
| C6SZI7 Peptidyl-prolyl cis-trans isomerase | 825 | 3e-086 |
| B9RDE9 Peptidyl-prolyl cis-trans isomerase | 820 | 1e-085 |
| B9GPI3 Peptidyl-prolyl cis-trans isomerase | 815 | 4e-085 |
| B9IC17 Peptidyl-prolyl cis-trans isomerase | 806 | 4e-084 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G01940.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 837 | 6e-090 |
| AT5G67530.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 454 | 2e-045 |
| AT2G36130.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 433 | 4e-043 |
| AT3G44600.1 CYP71 (CYCLOPHILIN71); chromatin binding / histone binding / peptidyl-prolyl cis-trans isomerase | 428 | 2e-042 |
| AT4G33060.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein | 329 | 5e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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