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Information for unigene UN20714

FASTA Sequence
Unigene ID: UN20714Length: 1263 SSR 
TATATCATAAATAAAGTATATCCCGCCCGTTGGGCGGGCCGATCCTAGTTCTATATAAAGCTCAGTTTCTTCCAAAATTACATACA
TTTGACCTTTTGTCATAAAGCTCTTCTCATTCTCCCCAACCACAATCTTAGTATTGATCCCTTTTAAAATCGGCGACCATCAAGAG
GAAGTGTTGAGCCACCGAGATTGCGTTAGAACTCATTGGACTGGTGAGACGAGAAAGCCTCTCATTGCTTGTTGTGCACCTTAAAT
CCAAAGATTTTAGGAACATAGCTTTGAGTGGGCTTCTGAGGTTTCAGGTTCCCGTAAGCCATGAGAAACAAATGTGGGAAAGTTGT
CCCAAAGTAAGCTCCATCAATGTTGCCTTGGTATTTAGATCGCGGGTAGTAAACATCCTCGCATTTTGGGCAGTATATCTTCACCG
TACGCGACCTCGGTGTATCAGATTGCCCAACCGGAAGACAAGACTGCCCGCTGCAGAACACTCTCGGACACCTTCCAAAATCACAG
TTCTTGTACTTCTCCAACATAGCAGCCATTCCTTTAGTAGTGAGAATGTAACGAACATGAATAAGACCATACAACATCTCAGCAGC
TGATTCCACCAGCTCATTCTGTTCTTCAGTAAACATATCACTGTTTGATGATTCAACATCTAAGATAAGATCAAGTGCATAGTCAT
AGTAAGGAACTTGAGCACTCAAGCCACAGAGATTAAAATCATCCTCCACATAATCTTCATCCACTTGACAGAAAAACTCGTTCCCT
CTCAAGTTACAGAACCACGAGATCCACGACGTGTCGTCATCATCACCACCACCTTCCGAGCCACTCACGTCGGATCCTTCTTCGCT
GTTATCGGTTTCAGATTGATCTGGAAGGTGAGATTTAGCTGTGCCTGTGGAGGTTGAAGGAGGGTTTGAGTCTTCGCCTTTAGAAG
TGGAAGTTTTCTTGAGATGTTTGTCTAAGGCTTCGTTGATCCGTTTCCGATCAATAGCTCCTCCGCTGAGGAGGTCCGTTCTCGAT
GAACCACCACTGCCCATTATGCCTCCGCTTCGATCTTTGTACATAATTTTGATGCTAAGAAGGTTTGATTTCGATTGATTCAAAGT
CTTGGACTTTGTTACCGTTTAAAGAGAGGAGAGAGGCGGAGAAATCTAGAGTAAGAGGAAAGAGAAGAAGTAGAAGAAGAAGAAGA
AGAGGCAAAGAGTGCCCTGCTCTTTCCCTGTTGTTTCTTCTCTTCGTCTACTGTTTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881976 hypothetical protein ARALYDRAFT_483599 [Arabidopsis lyrata subsp. lyrata]12262e-132
NP_181996 casein kinase 2, beta polypeptide [Arabidopsis thaliana]12253e-132
XP_002878325 hypothetical protein ARALYDRAFT_486495 [Arabidopsis lyrata subsp. lyrata]11724e-126
NP_191584 casein kinase 2 subunit beta-3 [Arabidopsis thaliana]11367e-122
CAD32500 protein kinase Ck2 regulatory subunit 2 [Nicotiana tabacum]11034e-118

Swiss-Prot top hits (Blast detail)Scoree value
O80507 Putative casein kinase II subunit beta-412251e-133
O81275 Casein kinase II subunit beta-311363e-123
P40228 Casein kinase II subunit beta9535e-102
P40229 Casein kinase II subunit beta'9401e-100
P67868 Casein kinase II subunit beta6336e-065

TrEMBL top hits (Blast detail)Scoree value
Q24JI1 At3g6025011364e-122
Q8LPD2 Protein kinase Ck2 regulatory subunit 211033e-118
C6TE50 Putative uncharacterized protein10272e-109
B6TGH2 Casein kinase II subunit beta-410146e-108
Q9FQF6 Protein kinase CK2 regulatory subunit CK2B310057e-107

Arabidopsis top hits (Blast detail)Scoree value
AT2G44680.1 CKB4 (CASEIN KINASE II BETA SUBUNIT 4); protein serine/threonine kinase12269e-135
AT2G44680.2 CKB4 (CASEIN KINASE II BETA SUBUNIT 4); protein serine/threonine kinase12034e-132
AT3G60250.1 CKB3; protein kinase regulator/ transcription factor binding11362e-124
AT3G60250.2 CKB3; protein kinase regulator/ transcription factor binding11131e-121
AT5G47080.1 CKB1; protein kinase regulator9534e-103

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
104  67%
 
112  33%

Unigene MembersMember information