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Information for unigene UN20724
| FASTA Sequence |
| Unigene ID: UN20724 | Length: 1107 |
| SNP | ATACTTTAAACACAGGAAGGAGCTTTTATTGACCTTGAGAATGTACAACGGAAGAATAACAGAGAACAAAACAAATCTTATAACTT
AAAGAGAGGAATTGCAACAAGCATACACACAATCATATTGGATGTTTAGTGTTTTTCCCTTAGACTCTTGACCTCCTGCACTCAGG
AGGGAATCCTCTAGGGAACCTTTTGAGATCAGAGCAATAATTATAGATCATGAAGTATTTCTGCACCCATCTGAGCCTCCTCCTGC
CATATGCATTGAGCTCCTTTGCCGTTTGCAGTTCACTATCACTTAAAGAAGTCTTGAATTTGGGGTCACAGCCTGAAGAGGCAGTG
CAAGCCGCAGCGTTGAATCCTCTGTAGTAAGCTGTGAAAGGAGCCTTGGACCAGTCAGTCTTTACAAGACCACCTCTCGTAGCCCA
ATCATCTGCATTCCACAGGCTGGAGTAGATCCTCATTGGTTGGTTCTTTGGGAAAGGAACACCAAGCTTCTCTGCATTGTTGAACA
CTCTTATAGGCAAGTTGTCCACCAAGAATATGATGTGTTGAGGTCTCCAGACAATAGAGTAAGTGTGGAAGTTCTTGGTTGGGTCG
AACCAGAGATAAAACTGTTGTTCTCTGTTGCCTTTCCCTTGAGCAAAGACGTTGGTGTGGAGAACATAAGGCTTACCTGTCTCGTT
TCCAAGAAACTCGAAATCTATCTCATCATGTGTTGCTCCTTGCGACGACAAGTAGTAAGCAGTGACGGTGCCGGCTGAGTTTCCGG
CTACGAGTTTAAGCTGCATATCGATCCGTCCGAATAGATACTCTTTCTTGGATTTGAACCCCGACCCGGAAACCCGGTCTAGAGAC
AGGGACAGCATGTTTCCTCCGTTGAAGATTTTACCCCTGCGGTCACCCCACGTGAGGTCGAACTCGTCGAAGAAGTTGCCTGAGTA
GGCTGAACCGAACATCATTACCAGCAGAACAGCTGCCATGATGGTGATGGTGAGGCTCCAGCTTCGTCCCATTTGGGTTTAGATGG
TGGAGCTGAGGGGTGTGTGTTTAGTAAGATTTGAAAGTAAGTTGAGAAGATGATGTGATATTTATGTTTTGGTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_193149 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1440 | 3e-157 |
| CAB10192 xyloglucan endotransglycosylase-related protein XTR-7 [Arabidopsis thaliana] | 1433 | 2e-156 |
| XP_002868312 hypothetical protein ARALYDRAFT_493497 [Arabidopsis lyrata subsp. lyrata] | 1432 | 3e-156 |
| XP_002883457 hypothetical protein ARALYDRAFT_479888 [Arabidopsis lyrata subsp. lyrata] | 1361 | 4e-148 |
| NP_566738 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 1351 | 6e-147 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38911 Probable xyloglucan endotransglucosylase/hydrolase protein 15 | 1440 | 1e-158 |
| Q8LG58 Probable xyloglucan endotransglucosylase/hydrolase protein 16 | 1351 | 3e-148 |
| P35694 Brassinosteroid-regulated protein BRU1 | 1113 | 1e-120 |
| Q38910 Probable xyloglucan endotransglucosylase/hydrolase protein 23 | 944 | 4e-101 |
| Q38907 Probable xyloglucan endotransglucosylase/hydrolase protein 25 | 937 | 3e-100 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q5M726 At4g14130 | 1440 | 2e-157 |
| Q680R2 Putative xyloglucan endotransglycosylase | 1351 | 4e-147 |
| A2TEJ5 Xyloglucan endotransglycosylase/hydrolase XTH-21 | 1167 | 9e-126 |
| A9PBP3 Predicted protein | 1161 | 5e-125 |
| B9IA86 Predicted protein | 1154 | 3e-124 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G14130.1 XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1441 | 9e-160 |
| AT3G23730.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 1353 | 1e-149 |
| AT4G25810.1 XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 944 | 4e-102 |
| AT5G57550.1 XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 941 | 8e-102 |
| AT5G57560.1 TCH4 (Touch 4); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 936 | 3e-101 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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