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Information for unigene UN20729

FASTA Sequence
Unigene ID: UN20729Length: 989  SNP
GAAACGAGAGGAAAGTTGTAAAGAAATGAAAAAAAGTTGACTAGAAGCGGAGAAGTTGAATTTGGTTCCTCTTCATTCAATCAATT
GTAATTGGCATTTGGGGAAGTCGGAGAGTTTGGTTAATTTCGGGGTTTTGGTATTCTCCGATGGACGGTTCGAGTGACATCGATGG
TGATTCCGAGGGAAGAAATGAAGGAGGATCCTCCACGTCGGATTATCGATTGCTGGGGCGGCAAGTTACGGTTCATCAGTTCATGG
GCGGTGGCAAAGCTGCTGACTTGCTCTTATGGAGGAGAAGAAACCATTCCTTAGGGGTTATCGTTTTATCAACCGCAGCTTGGCTT
ACTTTCGAGCTTTCCGGATTGCCTTTCTTATCTGTTTCTTCGGATGTTTTACTTATTGGGATCGTTATATCATTCCTCCACGCCCA
GGTTTCTGCTTTTAGGAATAGACAGGCGGATTCGTTGCCAGAGCTTGTTCTATCCGAGGAAATGGTTCATAGTGCTGCTGCTTCCT
TCCGTGTAAAACTCAACCACTTGCTTGTGATGGCTCATGATGTCACAGTTGGCAACGATTTTCGGCTCTTCTTCAAGGTGGTGATT
TGTCTGTGGCTTCTCTCTGCCATCGGTAGCTATATTTCCTTCTGCACTCTTGTTTATATCGGGACCATCCTATCTGTAACAGTACC
GGCTTTGTACAGCAAATATCAAAGCAAAGTAGACAAGTGTTGCGGGTTGATTCACAGGCAATTGTCTCATCAATACAAGTTAGTTG
ACGAAAATGTTATAAGCAAACTCTCGTGGAGCTTATCCAAGGATAAAGATTCCTGAGCTTTTTAACTTTGGTGATTTTGAAAATGC
CTTTTACTTGTCTTCCTTCATAGTTTTCACTAGTTTGGGTTTCTTCTAATTTACCATTGTGGAGTATTATTATGTAACTAAAAGAC
GATATCAAGGATGAATATATAAAGATGGTTCCACTGTTCAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_974275 reticulon-like protein B16 [Arabidopsis thaliana]10092e-107
NP_001078133 reticulon-like protein B16 [Arabidopsis thaliana]10022e-106
XP_002884821 predicted protein [Arabidopsis lyrata subsp. lyrata]9644e-102
NP_974276 reticulon-like protein B16 [Arabidopsis thaliana]8382e-087
NP_001189857 reticulon-like protein B16 [Arabidopsis thaliana]8382e-087

Swiss-Prot top hits (Blast detail)Scoree value
Q8GYH6 Reticulon-like protein B1610143e-109
Q9SH59 Reticulon-like protein B33825e-036
Q6DBN4 Reticulon-like protein B63673e-034
Q9SUR3 Reticulon-like protein B13621e-033
Q9FFS0 Reticulon-like protein B43621e-033

TrEMBL top hits (Blast detail)Scoree value
B3H6K8 Uncharacterized protein At3g10915.410021e-106
B9IQ52 Predicted protein7251e-074
Q3EB93 Putative uncharacterized protein At3g10915.16382e-064
C6TFQ1 Putative uncharacterized protein6202e-062
C5X0S8 Putative uncharacterized protein Sb01g0360906004e-060

Arabidopsis top hits (Blast detail)Scoree value
AT3G10915.2 reticulon family protein10107e-110
AT3G10915.4 reticulon family protein10035e-109
AT3G10915.3 reticulon family protein8395e-090
AT3G10915.5 reticulon family protein8271e-088
AT3G10915.1 reticulon family protein6381e-066

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  57%
 
72  29%
 
111  14%

Unigene MembersMember information