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Information for unigene UN20756
| FASTA Sequence |
| Unigene ID: UN20756 | Length: 706 |
| SNP | GGAAGTTTCAAAAAAACACGAAGGAAGAGGATAGATAGAGAGAGAACAATGGCGCAGATGGTTGCGATGCCCGTAGCCCACTCCCT
CTCCCTCATTTGCAATTGGACTAAATCCAGTCCTCTCACTCGCAACACTCTCGCTCTGCCACCTACTAACGCTCCCAGTAAGCAGA
GTCTGAGCATCAGATGTGCTCGTGTGGGAGGTGTGGAGATTCCGAGTAACAAGAGGATTGAGTACTCTCTCCAGTACATTCATGGG
ATTGGTCGAACTAGGGCTCGCCAGATCCTCGTTGATCTCCAGATGGAGAACAAAATCACCAAAGACATGGCTGAGGAAGAGCTCAT
CATTCTTCGTGATGAAGTCTCCAAGTACATGATCGAGGGTGATCTGAGGAGATTCAATGCGCTTGCTATCAAGAGGTTGAAGGAGA
TACAGTGTTACCGTGGTGTAAGGCACATCCAAGGGTTACCATGTCGTGGACAGAGAACCAAGAACAACTGTAGAACTCTTAAAGGC
AAGAAAATTGCTATTGCTGGTAAGAAGAAAGTTTCCAAGTAACCAACTCATCTGAATCTTGGATGTCCTGTAATAATACTCTTTTG
TTCTGTCTCTAGTTTTCTCTGTTCTAAAATGTGATTTTGTAATCTCCTGAAACTTGGTTCGAATGGAGCCCTTTCCAGACTAATCT
CCAGCTTTGTTATTGTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_568299 30S ribosomal protein S13 [Arabidopsis thaliana] | 828 | 1e-086 |
| XP_002302256 predicted protein [Populus trichocarpa] | 658 | 7e-067 |
| XP_002306609 predicted protein [Populus trichocarpa] | 633 | 5e-064 |
| ACU15408 unknown [Glycine max] | 632 | 7e-064 |
| XP_002285833 PREDICTED: hypothetical protein [Vitis vinifera] | 628 | 2e-063 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42732 30S ribosomal protein S13, chloroplastic | 828 | 6e-088 |
| Q9RDV8 30S ribosomal protein S13 | 324 | 2e-029 |
| Q9CA19 Small ribosomal subunit protein S13, mitochondrial | 320 | 5e-029 |
| Q6YQZ7 30S ribosomal protein S13 | 319 | 6e-029 |
| B1VAC3 30S ribosomal protein S13 | 316 | 1e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PHT2 Predicted protein | 658 | 5e-067 |
| B9H7A3 Predicted protein | 633 | 4e-064 |
| C6T1G9 Putative uncharacterized protein | 632 | 5e-064 |
| C6SXY7 Putative uncharacterized protein | 621 | 9e-063 |
| B9RJA5 30S ribosomal protein S13, putative | 581 | 4e-058 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G14320.1 30S ribosomal protein S13, chloroplast (CS13) | 829 | 4e-089 |
| AT5G14320.2 30S ribosomal protein S13, chloroplast (CS13) | 541 | 1e-055 |
| AT1G77750.1 30S ribosomal protein S13, chloroplast, putative | 320 | 5e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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