Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN20758

FASTA Sequence
Unigene ID: UN20758Length: 1199 SSR 
GGAAATAATTTTCGTCGAGTATAGGTGAGGTGGAATTGCAGCCGTCAGATAACACGCGGTTGTTGATCTGAAGAATCTCTGCAGAG
AGAAAATTCAAACCAGCTTTCCATCGACGATACAAAACGACCAAATCTCCTCCTCTTCACGGTTTCCTTCCTGTCGTAAAAACTCT
TTCTTCTTACTATCTTTCCAAGAAAAGCTGTTGTTGTATCAGTGATTCGCTGTTGGAATAAAGGTTTTGCAATGGCGAGGATAAAG
CCTCAGGCTCTTCTTAATCAAAGCAAGAAGAAAAAGGGTCCAAGTCGTATAAGTATCTCCACGATTGTCGTGTGTAATCTTGTAGT
TGCTGTAGTCGTACTATCCTTGGTCACTACTTATCGCCATTGGTCCCAGAGGTCAAGAAACACACTTGAAACCCAGAGCCAGATCA
TAGATTTGAGGACACAAACGCTGCATCAGAACAAAAGAGTTTACGATTCTTCCTGGTTATGCTGATATAAACACATCAAAAGGTCT
CATAACTGTGGAACTCTTTAAAGATGCTTCCCCTGAAGCTGTCGACAGGTTTCTAGATCTATGTCAAAAAGATCACTTCAAGGGAA
TGCCGTTTCATCGGGTTATAAAAAACTACTTGGTGCAAGCTGGTCACTCCCCAGAGCTCGATACCTGTTGAAGAATGGACATCTAA
AGGGAAGCTCCCGTGGTCGCCTTAACACAAGCCCAAAACATGAAGCATTCATGTTGGGGGACACCAAAAACCAAAGGGAACAACAA
CAAGGACTTCGAGCTTCTCATCACAACGGCGCCAATCCCTGATTTTAATGATCAGCTTATAGTGTTTGGAAGAGTCCTTAAGGGGG
AGGATGTAGTACAGGAGATTGAGGAAGTGGATACAGATGAGCATTACCAGCCGAAATCACAAATAGGGATCATTAGCGTTACACTG
AAACGAGAATTATGAAAAAAATGAAAATATTTTTTCCTCTGTATATGAGGTCCATTTTCATACTCACTGTTTGTCAAAATCCTTTT
TTGAGGTTTTTTTCTTTCTTTAAAACTGATTATTTCCTTTTGTTTTGTAGTTTTATTTGATCTTCTTGAGGAAATATAATCTTTGT
TTAAAGTCCATGGTCTGGTTTTTGTTTTAGAATCGATAGTCTTCATAATAATAATAATAGTAAGATTGTGTTCAACAAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882485 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis lyrata subsp. lyrata]5668e-056
NP_187319 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana]5489e-054
XP_002277818 PREDICTED: hypothetical protein [Vitis vinifera]5013e-048
XP_002316040 predicted protein [Populus trichocarpa]4888e-047
XP_002311384 predicted protein [Populus trichocarpa]4744e-045

Swiss-Prot top hits (Blast detail)Scoree value
Q94A16 Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial3631e-033
P0C1J1 Peptidyl-prolyl cis-trans isomerase-like 21641e-010
P0C1J0 Peptidyl-prolyl cis-trans isomerase cyp151595e-010
Q5KKX7 Peptidyl-prolyl cis-trans isomerase-like 11579e-010
Q4WCR3 Peptidyl-prolyl cis-trans isomerase-like 11481e-008

TrEMBL top hits (Blast detail)Scoree value
Q9C835 Putative uncharacterized protein At3g666545486e-054
B9HX13 Predicted protein4886e-047
B9HIP0 Predicted protein4742e-045
C6T7D2 Putative uncharacterized protein4473e-042
B7FHA8 Putative uncharacterized protein4412e-041

Arabidopsis top hits (Blast detail)Scoree value
AT3G66654.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein5483e-056
AT3G66654.3 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein5483e-056
AT3G66654.2 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein5483e-056
AT2G47320.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein3648e-035
AT3G44600.1 CYP71 (CYCLOPHILIN71); chromatin binding / histone binding / peptidyl-prolyl cis-trans isomerase1748e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  100%

Unigene MembersMember information