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Information for unigene UN20773

FASTA Sequence
Unigene ID: UN20773Length: 1106 SSR 
CCACCACTCTCCCCTTCTCTGCACTCATTATCACACACTAATCTAGAGAGAGAAGAAGAAGAAGAAGAAGAAAACTTAAAGAGATG
GAAGGCAAGGAAGAAGATGTTAGAGTCGGAGCTAACAAATTCCCCGAGAGACAACCCATCGGAACATCTGCTCAGAGCGACAAGGA
CTACAAAGAGCCGCCCCCTGCGCCGTTGATCGAGCCCGGCGAGCTCGCTTCGTGGTCCTTCTGGAGAGCCGGGATCGCCGAGTTCA
TCGCCACGTTTCTCTTCCTTTACATCACCGTGTTGACCGTCATGGGTGTGAAGAGGTCACCGAGCATGTGTGCTTCAGTCGGAATC
CAAGGCATCGCTTGGGCTTTCGGTGGTATGATCTTCGCTCTCGTCTACTGCACCGCTGGTATCTCCGGTGGACACATCAACCCAGC
TGTCACGTTCGGTCTGTTCTTGGCCAGGAAGCTTTCGCTCACACGAGCTGTGTACTACATAGTGATGCAGTGCTTAGGAGCCATCT
GTGGAGCCGGTGTGGTCAAGGGTTTCCAACCGAAGCAGTACCAAGCTCTAGGAGGTGGAGCCAACACCGTAGCTCCTGGCTACACC
AAAGGAAGTGGTCTTGGTGCTGAGATTATTGGAACCTTTGTGCTAGTTTACACAGTCTTCTCCGCTACTGACGCCAAGAGGAACGC
TCGTGACTCTCATGTTCCTATTCTTGCACCTCTCCCAATCGGATTCGCTGTGTTCTTGGTCCACTTAGCAACCATCCCAATCACTG
GAACTGGAATCAACCCAGCAAGAAGTCTTGGAGCTGCCATCATCTTCAACAAGGACAACGCTTGGGACGACCATTGGGTGTTTTGG
GTTGGACCATTCATCGGTGCTGCACTTGCTGCTCTTTACCACGTGATAGTCATCAGAGCCATCCCATTCAAGTCCAGAAGCTGATT
GAGTTACTCTTAAAACAACATGTTCTCTTTTAGTTTGCTTTCTTTTGTGAATGTACTACTACTCCTACTAGTGTGAAACATTGTGT
GTATGTGTTGTTCCTCTTCTTTGCCTGATGCAAGACTCTTTATCTAAAACAAAGACATTCCCAGGATTCACGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAB61378 aquaporin [Brassica rapa subsp. campestris]14923e-163
BAA92258 plasma membrane aquaporin 1b [Raphanus sativus]14896e-163
CAA64896 transmembrane channel protein [Brassica oleracea]14861e-162
ACA50530 putative aquaporin [Brassica napus]14861e-162
ACA50529 putative aquaporin [Brassica napus]14852e-162

Swiss-Prot top hits (Blast detail)Scoree value
Q06611 Aquaporin PIP1-214794e-163
P61837 Aquaporin PIP1-114581e-160
P61838 Aquaporin PIP1.114581e-160
Q08733 Aquaporin PIP1-314176e-156
Q39196 Probable aquaporin PIP1-414033e-154

TrEMBL top hits (Blast detail)Scoree value
O04671 Aquaporin14922e-163
Q9MBA0 Plasma membrane aquaporin 1b14894e-163
A9X4U3 Aquaporin PIP114861e-162
B1PRK2 Putative aquaporin14861e-162
Q39384 Transmembrane channel protein14861e-162

Arabidopsis top hits (Blast detail)Scoree value
AT2G45960.1 PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B); water channel14803e-164
AT3G61430.1 PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A); water channel14597e-162
AT3G61430.2 PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A); water channel14597e-162
AT1G01620.1 PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C); water channel14184e-157
AT4G00430.1 PIP1;4 (PLASMA MEMBRANE INTRINSIC PROTEIN 1;4); water channel14042e-155

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
203  60%
 
191  20%
 
111  20%

Unigene MembersMember information