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Information for unigene UN20781
| FASTA Sequence |
| Unigene ID: UN20781 | Length: 981 |
SSR | | TTTTTTTGCTTTATCAAATCATAGAAATGCAAGTTTCTGGGGAAAACGACTACGCCTTACAAATGGATGCTCAGTTCTTAAAAGTT
TCAAAATAACACCTAAGGCAAGAAACAAAAAACAATAAACGACACTTAAAAAAAAAAGATTTGAAGTTCTTCAAGCCTCGCTCTTC
TTTTTTCTTATCCTTCTTTTCCTTCTTCTTGGCAGGCATTTCGGTTTCTTCTTCCTCATGCTTCCTCTTCTTCTTCTTCTTTGAAG
GTTCCTCAGATTTGGGCTCTTCGGTCTCAGGCTCTACTTCAGCCTTCTTCTTCTTTGACTTCTTCTTAGATGGCTCCTCAGTCTTG
GCTTCTTCCTCCTCTGCTTCAGCCTTCTTCTTCTTCTTTTTATCCTTCTTCACACTCTCCTCAGCTTTAGAAGTTTGTCCAATAAC
AGAGTCCGCAGCAGTGTTGTAAGTCTTAGCAGGAGTAATCAGACCACCAGATCCCACCTTCTTATCCTTGTCATAAGCCTCAATCT
TTGGTTTGCCTTTAGCTGAGCCAGAGAGACGTCCTGCGTCTTTCCCTTCCAGACTTCTCAACCTCGCTTCAAGCTTTAAACGGTTC
TCAACTCCCATACTATTGTCCTCCCCATCACCGAGAGCATCACAACGGATAGCAAGGGCAGCTTTCGCAGCAAGCGACCTTGAGAT
TTTACCCTTGTTCTTCGGCGCAGCTTGGCCAACCACAGATGCATGGTAGATCAGACCATACTTAGGAGTAGCGTGCTTGGTCTTCA
GAGCTCTGAACAGAGCCTTCTCAGCTCCAAGAATCTGAATAGTGCTCCCAGGCTGCTTTGAGAGGTTCAACAAACTACCACCGTGA
GAGATTAAACGAGCACCGACAAGCTCACCAACGAGACTGGTCAGGTTCGGCGCAATCGTGTTCATCCTGCTCTTCAAGTAGTCGTA
AAGCTGAGCTCTGTACTCAAAGAGACAGAACCTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_198064 putative nucleolar protein 5-1 [Arabidopsis thaliana] | 1109 | 6e-119 |
| XP_002874406 hypothetical protein ARALYDRAFT_489610 [Arabidopsis lyrata subsp. lyrata] | 1088 | 2e-116 |
| XP_002884489 hypothetical protein ARALYDRAFT_896572 [Arabidopsis lyrata subsp. lyrata] | 1067 | 4e-114 |
| NP_187157 putative nucleolar protein 5-2 [Arabidopsis thaliana] | 1046 | 1e-111 |
| AAC16330 SAR DNA-binding protein-1 [Pisum sativum] | 933 | 2e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04658 Probable nucleolar protein 5-1 | 1109 | 3e-120 |
| Q9MAB3 Probable nucleolar protein 5-2 | 1046 | 5e-113 |
| Q4R779 Nucleolar protein 58 | 633 | 4e-065 |
| Q9Y2X3 Nucleolar protein 58 | 615 | 5e-063 |
| Q6DFW4 Nucleolar protein 58 | 609 | 3e-062 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O65334 SAR DNA-binding protein-1 | 933 | 1e-098 |
| B7FLW5 Putative uncharacterized protein | 912 | 3e-096 |
| O65335 SAR DNA-binding protein-2 | 909 | 6e-096 |
| Q9AV96 MAR-binding protein | 905 | 2e-095 |
| B8APG2 Putative uncharacterized protein | 886 | 3e-093 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G27120.1 SAR DNA-binding protein, putative | 1109 | 2e-121 |
| AT3G05060.1 SAR DNA-binding protein, putative | 1046 | 5e-114 |
| AT5G27140.1 SAR DNA-binding protein, putative | 532 | 2e-054 |
| AT1G56110.1 NOP56 (Arabidopsis homolog of nucleolar protein Nop56) | 484 | 7e-049 |
| AT3G12860.1 nucleolar protein Nop56, putative | 446 | 2e-044 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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