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Information for unigene UN20788

FASTA Sequence
Unigene ID: UN20788Length: 983  SNP
GGACCAGATCACTCACTCACTCATCATCACTCCTAAGTCCTAACCGCAGCCAGAGAAGGAAAATGAAGTCGTTAGCTTCCCCTCCG
TGTCTCCGCCTAACTCCGACGACACGTTATCACCTCCCTTCGCGTCAATCTTCTTCCGCCTGTTACCCTCACGTTGTCTCTTCTGT
AATCAAATCCAGTAGTACCCTATCATTCGCCTCATCCGCATCCGGTTTCGCGTCACCACTCTCCGTAGAGAAGGAGCTACGCTTAC
AGACGGCTGCTGTCCGCCACGTCACTGGGTCGCTAATCAGAGGAGAAGGTCTTAGATTCGCTATTGTTGTTGCTCGTTTCAATGAG
GTTGTGACGAAGTTGCTTTTGGAAGGAGCTATTGAGACTTTCAACAAGTACTCTGTTAGAGAAGAAGACATCGAGGTTATTTGGGT
TCCTGGTAGCTTTGAGATAGGTGTTGTTGCACAGAACCTTGGGAACTCAGGAAAGTTTCATGCCGTTTTATGTATCGGTGCTGTGA
TAAGAGGAGATACTACTCATTATGATGCTGTTGCCAACTCTGCTGCATCTGGAGTACTTTCTGCTGCCATTAATTCAGGTGTTCCA
TGCATATTTGGTGTACTGACATGCGAGGACATGGATCAGGCTCTGAATCGATCTGGTGGCAAAGCTGGAAACAAGGGAGCTGAAAC
TGCTTTGACGGCGCTCGAGATGGCGTCCTTGTTTGAGCACCACCTAAAATAGCTGCTCGTTTCATGGATGAGCAAAATGATCACGT
ATGAGAACTTGTTTCCTGTAAACCATTTGGTTACAATCCATCCAATCTCCGAAACTGTATTGTCAAAAATGTTGTCTTTTACCTCG
GTCAGTGAGATATATTTTGAACGCTTTTTGTAAGTTTCTGATCTTTTGTTTTGAATCGTGTAATAATAGTTCCTCCGAATTTTGGG
GGCGAATGGGTTATTATCAATAATATGATTCTTTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181933 6,7-dimethyl-8-ribityllumazine synthase [Arabidopsis thaliana]9922e-105
XP_002880079 hypothetical protein ARALYDRAFT_903810 [Arabidopsis lyrata subsp. lyrata]9832e-104
XP_002280427 PREDICTED: hypothetical protein [Vitis vinifera]7271e-074
XP_002331646 predicted protein [Populus trichocarpa]7144e-073
CBI24765 unnamed protein product [Vitis vinifera]7054e-072

Swiss-Prot top hits (Blast detail)Scoree value
O80575 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic9921e-106
Q9XH32 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic6245e-064
P50856 6,7-dimethyl-8-ribityllumazine synthase4166e-040
A5D1C7 6,7-dimethyl-8-ribityllumazine synthase4158e-040
Q7VM44 6,7-dimethyl-8-ribityllumazine synthase4122e-039

TrEMBL top hits (Blast detail)Scoree value
B9N8M6 6,7-dimethyl-8-ribityllumazine synthase7143e-073
B9SZV2 6,7-dimethyl-8-ribityllumazine synthase7035e-072
B9HGA8 6,7-dimethyl-8-ribityllumazine synthase (Fragment)6651e-067
Q9XH13 6,7-dimethyl-8-ribityllumazine synthase (Fragment)6507e-066
Q5ZQU1 6,7-dimethyl-8-ribityllumazine synthase6435e-065

Arabidopsis top hits (Blast detail)Scoree value
AT2G44050.1 COS1 (COI1 SUPPRESSOR1); 6,7-dimethyl-8-ribityllumazine synthase9937e-108

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1110  56%
 
102  11%
 
125  28%
 
91  6%

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