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Information for unigene UN20795

FASTA Sequence
Unigene ID: UN20795Length: 1480  SNP
GGATTTTGTAAATCTGGAAGCTGACTCTTTCCCGTCGGAGAAGTTTCAAATCCCGCCGTCGACGATCGACGAATCGATCCCAGAGC
ACTCGAACAGCTTTGAGAAAACCTCCGATCTCGTTTTCACTCGTCGCGAAACGATTCGCCCCTCATCCGTCGCTAATTGCGTGCTT
ATAATATGAAACAACGATCCTGTTCAGATCTATAAGCTAACTGAGAGAAAAAAACCTGTCTCGATCCATTAGTTACTGAGTTTTTC
TTTGTTTAACATCATCTATTAGCTGATAATGGCGACCAGGAATCGTACGCTCTTGTTCCGCAAGTACAGGAACTCTCTGAGGAGCG
TCCGCGCTCCGATGACGGATTCGAAATCCGGCGTAGGTCCCGTGATCGAGATGGCGAGCTCGTCTCTGTTGCATCCCAAACGATCG
TATGCTCCGGTCAGTACCGAAGATCCAGGGAGTTCGAGTAGAGGAGGAGCAGTAACAGTGGGATTACCACCAGATTGGGTTGATGT
CTCTGAGGAGATTTCAGTGAACATTCAGCGTGCGAGGACTAAAATGGCTGAACTCGGGAAGGCTCATGCGAAAGCCTTGATGCCTA
CGTTTGGTGATGGTAAAGAAGATCAGCATCAGATCGAGTCTTTGACGCAGGAGATTACTTTCCTGTTGAGGAAATCAGAGAAGCAG
CTTCAGAAGCTATCTGCAGCTGGACCTTCTGAAGATTCAAATGTCAGGAAAAACGTGCAGAGATCTCTTGCTACTGATCTCCAATT
CCTTTCTATGGAGCTCCGCAAGAAGCAGTCTACATATCTGAAACGCTTGAGACTACAAAAAGAGGATGGAGGGGATTTAGAGATGA
ATCTCAACGGAAGCAGCTCTAGAGCAGATGATGATGACTTTGATGATATATTATTTAGTGAGCATCAGATGAGCAAGATCAAAAAG
AGCGAGGCAATATCCGTAGAGAGGGAGAAAGAGATTCAGCAGGTTGTTGAATCTGTAAACGAGCTCGCTCAGATAATGAAGGATCT
TTCTGCACTTGTAATTGACCAGGGTACGATAGTTGATCGGATCGACTATAACATCCAAAACGTTGCTAGTACAGTTGAAGATGGTC
TCAAACAGCTGCAAAAGGCAGAACGTACACAGAGAAATGGAGGTATGGTTATGTGTGCGTCAGTTCTTGTTATCCTCTGCTTCATC
ATGATAGTACTCTTAATCCTTAAAGAGATTTTCTTGTGACTCAAGAAAGAGGTTGATCCCTCATTCTTTTATTCTTTCATAATGGG
AAACCCAACAATGTTTGCGTTGCTCATTGTTCTGCTGTATCCACCAAAATTGTCTGAATGAATATAAATTCGAATTGCGTTCTCTT
TAGTATTTGGATTTTGAGGAGTTTGTTTGTAAGGGTTTATTTACATGTAAAGAAGTTTTTAACTATGATTAAGAATCTATGGATAA
AAAGACAGATTACAAACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874333 hypothetical protein ARALYDRAFT_910771 [Arabidopsis lyrata subsp. lyrata]13383e-145
NP_198050 syntaxin-41 [Arabidopsis thaliana]13374e-145
XP_002882432 hypothetical protein ARALYDRAFT_477864 [Arabidopsis lyrata subsp. lyrata]13123e-142
NP_850519 syntaxin-43 [Arabidopsis thaliana]13105e-142
XP_002862921 hypothetical protein ARALYDRAFT_497246 [Arabidopsis lyrata subsp. lyrata]13097e-142

Swiss-Prot top hits (Blast detail)Scoree value
O65359 Syntaxin-4113416e-147
Q9SUJ1 Syntaxin-4313102e-143
Q9SWH4 Syntaxin-429869e-106
O14662 Syntaxin-164132e-039
Q8BVI5 Syntaxin-164052e-038

TrEMBL top hits (Blast detail)Scoree value
B7X6S7 Syntaxin12423e-134
B9RFG2 Syntaxin, putative12361e-133
B9N4N4 Predicted protein12307e-133
B9I719 Predicted protein12129e-131
A5AZS5 Putative uncharacterized protein11439e-123

Arabidopsis top hits (Blast detail)Scoree value
AT5G26980.1 SYP41 (SYNTAXIN OF PLANTS 41); SNAP receptor13424e-148
AT5G26980.2 SYP41 (SYNTAXIN OF PLANTS 41); SNAP receptor13424e-148
AT3G05710.2 SYP43 (SYNTAXIN OF PLANTS 43); SNAP receptor13112e-144
AT3G05710.1 SYP43 (SYNTAXIN OF PLANTS 43); SNAP receptor13003e-143
AT4G02195.1 SYP42 (SYNTAXIN OF PLANTS 42); SNAP receptor9876e-107

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  11%
 
123  33%
 
211  11%
 
72  22%
 
92  22%

Unigene MembersMember information