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Information for unigene UN20822

FASTA Sequence
Unigene ID: UN20822Length: 1887 SSRSNP
GGGCGGTGAAGCGGTTGACACACGCTGATTCTTCATATATACCCCCCATGAGGAAGACGCTTTCTGATACACAACACTCACCACAT
TCTCTCACACTTTTTCTCTCTTCTTCACATAGTACATAGAAACAGAAAAGAAGAGAAACTCTTTAGAGATCAAAAGATGAACATCG
CTCACACCATCTTCGGCGTTTTCGGAAATGCAACTGCTCTGTTTCTCTTCTTGGCTCCTTCGATAACATTCAAGAGAATCATCAAG
AGCAAATCGACTGAACAGTTCTCTGGCATCCCTTACCCTATGACTCTCCTCAACTGCCTCCTCTCCGCCTGGTACGGACTTCCCTT
TGTGTCCAAAGACAACACGCTCGTGAGCACGATCAACGGAACAGGAGCAGTGATCGAGACAATCTACGTGTTGATCTTCCTTATCT
ACGCACCAAAGAAGGAGAAAGCTAAGATCTTTGGCATCTTCACTGCCGTCTTGGCCGTGTTCGCAACCGTGGCTCTCGTCTCTCTC
TTTGCCCTCCATGGTAACGCGAGAAAACTCTTCTGTGGTATTGCAGCCACTGTTTTCTCCATCATCATGTACGCTTCTCCCCTCTC
AATCATGAGGTTGGTGATAAAGACGAAGAGTGTAGAGTACATGCCCTTCTTTCTCTCACTCTTTGTGTTCCTCTGTGGTACTTCTT
GGTTCATCTATGGTCTTATCGGTCGTGACCCTTTTGTTGCAATCCCAAATGGGTTTGGATGTGCTTTAGGAACACTGCAGCTGATT
CTCTACGTCATCTACTGCGGAAACAAAGGCGACAAATCTGCTGAAAAGGATGACAAGTCGCTGGAGATGAGAGGTGAGGAGAAGAA
GCAACATGTTGTTAATGGAAAGCAGCAAGAGCAGCAAGTTTAGATCCTTCAATGATTTGTTTTCGTTTCTCTGTATTTCGCTTTTA
ACTCTTGTTGATTAGAGTTTTAGTTGGGATGTAACAGAGATTAAAAATCTATGCTGAACAAAATGTAGGATTCTTAGTGTCTTCCT
AGTGATGAACGAGTGATTAAAGAAGACAAAAACCTTTGTGACATATACAAAAATGTAAAACAAAACTCTGCATTAATAAAAGAGAG
ACAGATAACAAATATAAGTAAACCATAAGTGTTAGGTTAGCTTTAAAAACCTCTGATCATATCCCTGATCTCTGGTTAATAATAAT
ACATGGAGATGGATTGACCTAACCAGTTGCAATATATATAACACAAACATTCGAAATAAAAACATAAAATAAGTCTCTTTTTTTTT
TTTAACATATAAAACACAACCGAGTCTTTTTTTACCTCCAAGCCGAAGCAACGATCAAACTTTTGTCCTCCCAGCAAAAGTGGAGC
TCACCCATCTCCTCTTTAAGCGTATACTTACTGCAATAATCTCGCTTAATGAGATTCTGTATATTGCTCCTCACTCTACCACTCAT
TGGTCTCGGACTGAACCCTGCCATCATCATCCTCGCTCTCCACTTACCAGCAACCTCGTACCTCTCGATCCTCTCTTCTCCTTCGC
AAGCAACGATGTTGACAATGTCTCTAGCCAGACACTGCCTCTCCACGTTCATCCTCTCTTGGCTCTCTCTAGGAAGCGTCATGTCC
AGAGAGTCGAATACCGCGGAGTAGTACTCGTAAGCCTCCATGAACCTCGTGAAGAAAGGTGAAGTGTTCGTGTTCACGTCTTGTTC
GACCACCGTGACTAGCTTCGGGTTCAAGATATTGGACAAAGAGGAAATCTGATTTAAACGTCGTGAAAAGCCAAAGGTAGAAGGAA
AAAAACCTCAAAGGTTTGACCTTTAGGTTCCTACTGTTTAAACAGAAGAGGACAACCACTCTCTCTCTCTCTCTTTTGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893163 nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata]11692e-125
NP_564140 Nodulin MtN3-like protein [Arabidopsis thaliana]11422e-122
XP_002526178 conserved hypothetical protein [Ricinus communis]9854e-104
XP_002307476 predicted protein [Populus trichocarpa]9513e-100
XP_002265836 PREDICTED: hypothetical protein [Vitis vinifera]9219e-097

Swiss-Prot top hits (Blast detail)Scoree value
Q9SDQ3 Scarecrow-like protein 16786e-070
Q8LFH5 Protein RUPTURED POLLEN GRAIN 14303e-041
Q9LDL7 Scarecrow-like transcription factor PAT14294e-041
Q9S7H5 Scarecrow-like protein 214205e-040
Q8GVE1 Chitin-inducible gibberellin-responsive protein 24196e-040

TrEMBL top hits (Blast detail)Scoree value
Q8L9J7 Putative uncharacterized protein11422e-122
B9SJK9 Putative uncharacterized protein9852e-104
B9H7N2 Predicted protein9512e-100
Q9LPL1 F24J8.9 protein9162e-096
C6TBS9 Putative uncharacterized protein9064e-095

Arabidopsis top hits (Blast detail)Scoree value
AT1G21460.1 nodulin MtN3 family protein11428e-125
AT1G21450.1 SCL1 (SCARECROW-LIKE 1); transcription factor6794e-071
AT4G10850.1 nodulin MtN3 family protein5065e-051
AT1G66770.1 nodulin MtN3 family protein4894e-049
AT3G14770.1 nodulin MtN3 family protein4771e-047

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  17%
 
66  50%
 
101  8%
 
82  17%
 
121  8%

Unigene MembersMember information