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Information for unigene UN20840

FASTA Sequence
Unigene ID: UN20840Length: 1679 SSR 
GGGAAGCAAACTCTGAAAATATATTTCAATTATATTTTCTTCTCTCTCTCTCGAAACTTTTTTTTTGGCTACCAACCAAAGTTCTC
TCTTCTTTGGTTTCTCTTATTTAGCTTACAACCTTGAGGAGAATCAAACCAGAGAGAGGATTCAAGTTTGAAACCTCAAACATCAA
AAAAAAGCTTAGAACCAAAAAAAAATGTGGGATCTGAACGACTCACCACACCAAACACTTCCTCAAGAAGAATCTGAAGAGTTGTG
TTATTCTTCACCGGGTAAACGGGTCGGATCTTTCTCGAACTCAAGTTCATCTGCTGTAGTCATCGAAGATGGATCCGATGATGATG
AGCCTAACCGTGTCAGACCCAACAACCCACTTATCACCCATCAGTTCTTCCCAGAGATGGAAACTAGCTTAGGGGGCGGTGGTGGT
GGTGGTGGTGGTCCCGGGTCAGGCTTTCCTCGGTCTCACTGGTTTGGTGTAAAGTTTTGTCAGTCCGATCTAGCTACCGGATCATC
GGCCGCTAAACCCACCACTGTCGCCGCCGTGGTGGAGCCGGCGCAGCCGTTGAAAAAGAGCCGGCGTGGACCACGGTCGAGGAGTT
CTCAGTATAGAGGCGTCACGTTTTACCGGCGAACCGGGAGATGGGAATCTCATATTTGGGACTGTGGGAAACAGGTTTACTTAGGT
GGATTTGACACTGCTCATGCAGCTGCTCGAGCATATGATCGAGCTGCTATTAAATTTCGTGGAGTGGTAGCGGATATCAACTTTAC
CATTGAAGACTATGATGATGACTTGAAGCAGATGACGAATTTAACGAAGGAAGAGTTCGTGCACGTACTTCGCCGACAGAGCACAG
TCTTCCCTCGAGGAAGTTCGAAGTATAGAGGTGTTACTTTGCATAAGTGTGGTCGTTGGGAAGCTCGAATGGGTCAATTCTTAGGC
AAAAAGTATGTTTATTTGGGTTTGTTCGACACCGAGGTTGAAGCTGCTAGAGCTTACGATAAAGCTGCAATCAAGTGTAATGGCAA
AGACGCTGTGACTAACTTTGATCCAAGCATATACGACGACGAATTGAACGCCGAGTCATCAGGGAATCATATTCAACAAGATCATA
ACCTCGATTTGAGTTTGGGAAACTCGGTTAATTCGAAGCAAAAGGGTCAAGATATGCGGCTCAAGATGAACCAACAAGATTCTCTT
CACCCTAATGAGATTCTTGGATTAGGTCAAACCGGAATGGTTAACCATATCCCAAATTCAAATCTCCAATTTCCGGGCAGCAGCAA
CATTGGCGGCGGAGGAGGATTCTCGCTGTTTCCGGTGGCTGAGAACCACCGGTTTGATGGTCGGACCACTACGAACCAAGTGTTGG
CAAATGCTGCAGCATCATCAGGATTCTCTCCTCATCATCACAATCAGATTTTTAATTCCACTTCTACTTCTCATCAAAACTGGCTG
CAGAGCAATGGCTTCCAACCTCCTCTCATGAGACCTTGAATCTCTAATATTTCTATCTTTTATTTTATAGATATGTGAAACAAATT
TGGGGAAAATGAACCTTAAAAAGCACCCCTATGGTCTTGGTCATTAAATTAATTACGGCTTTTCGTGTGTTTATTTCTCTTAAACG
TCTATTTTATTAGGCCAAGAAAATTTCTTAAAAAAACTTAATGGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33685 unnamed protein product [Thellungiella halophila]21252e-236
ADU04499 APETALA2 [Brassica napus]20321e-225
NP_195410 Floral homeotic protein APETALA 2 [Arabidopsis thaliana]19882e-220
XP_002866964 hypothetical protein ARALYDRAFT_490899 [Arabidopsis lyrata subsp. lyrata]19746e-219
CBI21387 unnamed protein product [Vitis vinifera]11271e-120

Swiss-Prot top hits (Blast detail)Scoree value
P47927 Floral homeotic protein APETALA 220263e-226
Q9FH95 AP2-like ethylene-responsive transcription factor TOE38793e-093
Q9SK03 Ethylene-responsive transcription factor RAP2-76373e-065
Q9LVG2 AP2-like ethylene-responsive transcription factor TOE25495e-055
Q6PV68 AP2-like ethylene-responsive transcription factor SMZ4886e-048

TrEMBL top hits (Blast detail)Scoree value
Q84U24 LIPLESS111214e-120
C1KBJ2 Transcription factor APETALA211062e-118
B9H6I6 AP2 domain-containing transcription factor10991e-117
B9HH99 AP2 domain-containing transcription factor10982e-117
B5B0E0 Transcription factor APETALA210963e-117

Arabidopsis top hits (Blast detail)Scoree value
AT4G36920.1 AP2 (APETALA 2); transcription factor20262e-227
AT5G67180.1 AP2 domain-containing transcription factor, putative8792e-094
AT2G28550.1 RAP2.7 (RELATED TO AP2.7); DNA binding / transcription factor6373e-066
AT2G28550.2 RAP2.7 (RELATED TO AP2.7); DNA binding / transcription factor6373e-066
AT5G60120.1 TOE2; DNA binding / transcription factor5494e-056

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
125  63%
 
72  25%
 
111  13%

Unigene MembersMember information