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Information for unigene UN20858

FASTA Sequence
Unigene ID: UN20858Length: 1383 SSR 
GATGGTCACATCCTGAGACCTTTCTTTGATGATTGGCCACGATCAACTGACTATACCTCAAGTCCAATGAGCTCATCGACTTGTCA
TCTTTCCATCTCCATGCCCGGTAACCCTTCCTCAGACGTTTCCTTAAAGCTTTCCACAGGAAATGAAGAAGAAGAAGCAAACATGA
GAAACAAAAATGAGAGGGAGCAACAGCAAAGCATGAATTGGTGGAGCAGTGGAGGGAACCACAACAATATGGGTGGGCCATTGGCT
GAAGCCTTGAGGTCAGCCTCTTCAACGTCAAGTGTTCTTCAACAAATGGGAATCTCAACTCAAGTCTTTCACTGAAGAAAGTGTTG
AAAAAACAAAAAAAACAAATCAAGTCCTCTTTTAGCTGCCTCTGCATCTGCACTTTCTTCATTATGGTTCTTTTCTGAATTGTTTT
TGTACCGGTGACGTTGTTAGGCCTAATTTGCCTGCTTTGGAACTGTTTTCTTTCTTTCTTTCCTATGCAGAAATTTATGTCTGAAG
TTTAAGTATGTTGGTGATAAGTATGTCATAAGTCAGTACCTGAGAAGTTTCTTGGGTTTAGATGTTGGTAATATGTAAGTTGGATT
AGCTATTTCAGATCCTTTTAATATGGTTGCATTTTCATTGGGGTACATAATATGTTACATGGTAGTTCACTTTTAATAGAGATGAC
TTGAAAAGAATCTAATACAACAAAAAAACCTCAAAACAAATTTAAAACTCTTTTAAAATGCAACATCCAATTCTTTTTCTTTCTTT
CTCATTGCAAGGCTCCAACAGTCTTGTTGATCTCCTCCAGTTTCTTCATCCTTACTCCTTCGCTTTCAGCCAGTAGCTCCATTAAC
ATGGAAACAAGGTGAGTTTTCTCTTTGTTCTTTTCGTTGAAAGCTTCTAATGTCTCTTTGTATTCCTTCTCCTTCTTCTGACAGCT
TTGAGCTAAAGATTTGATTTCTCGGTTCGCCATGTCGATTTTTCCTCACAATTCCAACTTCTTTTCAATAGGATCTCCCATAATCT
CCAGCTCCTGTTTTTATTTTTTAGTTAACAACATTATCAACTTCTTCTTGTCTGAACAGAAAAAAAAAGGCTTTTTCTTTTTAATG
TTACTTACTTCCAATGTTTGAGTCAAGCATCTTGTAACTTCCTCAGCAAAACCAAGCCTCTGCTGGACTTTCTCCTTAACAGTCAT
CTTCTTCCTCTCGATCTCTTCCTCTCGTGCTTGAAACCTCGACACCGCCACTTTCCATATCTCTTCTTCTTCGTCCTTCTCCTCCA
TTGGAAGCTTACCGTTGGTGTTGTTGACTGCAGCAGCAGCAGCAGCTCCTCCTGAGTTCTTGATACTCATAATTCTTTTATTATTA
CTACTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877892 hypothetical protein ARALYDRAFT_323835 [Arabidopsis lyrata subsp. lyrata]4701e-044
XP_002876173 hypothetical protein ARALYDRAFT_485662 [Arabidopsis lyrata subsp. lyrata]3518e-031
NP_190858 uncharacterized protein [Arabidopsis thaliana]3482e-030
AAM61492 unknown [Arabidopsis thaliana]3454e-030
XP_002879606 hypothetical protein ARALYDRAFT_482609 [Arabidopsis lyrata subsp. lyrata]3177e-027

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LFA1 Putative uncharacterized protein At3g529003481e-030
Q8LFC2 Putative uncharacterized protein3453e-030
B3H4H5 Uncharacterized protein At2g36355.23141e-026
Q2V423 Putative uncharacterized protein3141e-026
B9HVZ9 Predicted protein2782e-022

Arabidopsis top hits (Blast detail)Scoree value
AT3G52910.1 AtGRF4 (GROWTH-REGULATING FACTOR 4); transcription activator4742e-047
AT2G36400.1 AtGRF3 (GROWTH-REGULATING FACTOR 3); transcription activator3764e-036
AT3G52900.1 unknown protein3495e-033
AT2G36355.1 unknown protein3154e-029
AT2G36355.2 unknown protein3154e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  50%
 
82  50%

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