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Information for unigene UN20867
| FASTA Sequence |
| Unigene ID: UN20867 | Length: 1762 |
SSR | | CGGCACGAGGCTGTCTCAACCATGGATAGCGATACACTCACCGGCTTATTGAAGAACGTCGCCGAGAAATTCCCCGATCGGCGAGC
GCTCTCAGTTTCCGGAAAATTCGACCTAACTCACGCGCGTCTCAACGATCTAATCGAACGCGCCGCTTCACGCCTCGTCTCCGCCG
CCGGAATCAAACCAGGCGATGTCGTGGCTCTCACTTTCCCCAACACCGTCGAGTTTGTGATTATGTTTCTGGCGGTGATAAGAGCT
CGAGCCACGGCGGCGCCGTTGAACGCGGCGTACACGGCGGAGGAGTTCGAGTTTTACCTCTCGGATTCGGATTCGAAGCTGTTACT
AACCTCCAAAGAAGGCAACGCTCCGGCTCAAGAAGCAGCTTCGAAGCTCAGCATCTCTCACGCCACCGCCACGCTCCTCGACGCCG
ACTCGGATCTTTCTCTCTCCGTCGCCGATTCCGACTCGGTCGCCGACTCGGCTTCCGAGCTCGTTAACAGCCCCGACGATCCGGCT
CTCTTCCTCCACACTTCCGGCACCACGAGCCGTCCCAAGGGCGTACCCCTCACGCAGCTGAATCTTGTTTCATCCGTCAAGAACAT
TAAATCGGTTTACAAGCTCACCGAGTCTGATTCGACTGTGATTGTTCTCCCTCTGTTCCACGTTCATGGACTGTTAGCTGGGTTGC
TCAGCTCGCTTGGAGCTGGCGCGGCTGTGACTCTACCAGCTGCTGGTAGATTCTCTGCGACGACGTTTTGGGCAGACATGAAGAAG
TATAACGCCACGTGGTATACTGCTGTTCCCACCATTCATCAGATCATATTGGACCGTCATGCGAGCCAGCCTGAGCCGGAGTACCC
TAAACTTCGGTTCATCAGGAGTTGCAGTGCTTCTTTGGCTCCGGTGATATTGTCCAGGCTTGAGGAAGCTTTTGGAGCACCGGTTC
TAGAGGCTTATGCTATGACGGAAGCAACTCACCTGATGAGTTCTAATCCTTTGCCGGAGGAAGGTCCACACAAGCCTGGGTCTGTT
GGGAAACCGGTGGGTCAAGAAATGGCGATCCTCAATGAGCAAGGGGAGATACAAGAGCCGAATAGCAAGGGAGAGGTTTGTATTAG
AGGCCCAAATGTGACGAAGGGTTACAAGAACAACCCGGAGGCCAACAAGGCGGGTTTCGAGTTTGGGTGGTTCCACACTGGTGATA
TTGGTTACTTTGATTCTGATGGGTATTTGCATCTGGTGGGTCGGATCAAAGAGCTTATTAACCGTGGAGGTGAGAAAATATCCCCA
ATTGAAGTGGACTCAGTGCTCTTAACTCATCCTGATGTTTCTCAAGGAGTTGCGTTCGGGGTTCCTGATGAGAAATATGGAGAAGA
GATTAACTGTGCGGTTATTCCAAGAGAAGGAACAACAGTGACCGAAGAGGACATAAAAACGTTCTGTAAGAAGAATTTGGCAGCTT
TCAAGGTGCCAAAGAGAGTGTTCATCACTGATAACCTCCCCAAAACTGCCTCCGGTAAGATTCAGCGCCGTATCGTCGCCCAGCAT
TTCCTCGAAAAACCCTAAATAAAACACTGTACACCATCTTACTGGAATCCGTCGGTGTTGAGTCGTAGCTTGTTACTCAAGTGGTT
TTGCTCTCTCTCTCTCTTTGTCTTTTTCCCTTTCGGGGTTTGTATGTTACGAAGTTTCATGTGTTATCATGATTAAAAGTGAACAT
GTAATAATAAAATTGGAAATAAAGTTGATAATAGTTGGTCGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002877640 AMP-dependent synthetase and ligase family protein [Arabidopsis lyrata subsp. lyrata] | 2525 | 9e-283 |
| NP_190468 AMP-dependent synthetase and ligase-like protein [Arabidopsis thaliana] | 2506 | 1e-280 |
| AAM65672 4-coumarate-CoA ligase-like protein [Arabidopsis thaliana] | 2499 | 9e-280 |
| XP_002267459 PREDICTED: hypothetical protein [Vitis vinifera] | 2146 | 8e-239 |
| CBI22725 unnamed protein product [Vitis vinifera] | 2141 | 3e-238 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O74976 Putative peroxisomal-coenzyme A synthetase | 1175 | 1e-127 |
| P38137 Peroxisomal-coenzyme A synthetase | 945 | 6e-101 |
| A9MQH7 Probable crotonobetaine/carnitine-CoA ligase | 554 | 1e-055 |
| C5D6U5 2-succinylbenzoate--CoA ligase | 502 | 1e-049 |
| O31826 Putative acyl-CoA synthetase yngI | 502 | 1e-049 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SMT7 4-coumarate-CoA ligase-like protein | 2506 | 1e-280 |
| Q8L9Z5 4-coumarate-CoA ligase-like protein | 2499 | 6e-280 |
| B9ID90 Acyl:coa ligase | 2141 | 2e-238 |
| Q946Z2 Putative acyl-CoA synthetase | 2129 | 5e-237 |
| B9R9A8 AMP dependent CoA ligase, putative | 2113 | 4e-235 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G48990.1 AMP-dependent synthetase and ligase family protein | 2507 | 4e-283 |
| AT4G05160.1 4-coumarate--CoA ligase, putative / 4-coumaroyl-CoA synthase, putative | 555 | 9e-057 |
| AT1G65060.1 4CL3; 4-coumarate-CoA ligase | 520 | 1e-052 |
| AT4G19010.1 4-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family protein | 512 | 8e-052 |
| AT3G21240.1 4CL2 (4-COUMARATE:COA LIGASE 2); 4-coumarate-CoA ligase | 505 | 5e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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