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Information for unigene UN20872

FASTA Sequence
Unigene ID: UN20872Length: 2241 SSR 
GGGAGTACATCTTGTTTTCTTCTCATTCTCTCTGTTTCAGCAATGGAGAGTACTGTAGTTATGATGATGAGAAGATCTATAGTTTA
TTTCTTTGTTTTTCTCTGCCTTCTCTGCTCTGTAAGCGGTTTACTTTCTTCTAAAGGAGTTAACTTTGAAGTGCAAGCTTTGATGG
ACATAAAGGCTTCATTACATGATCCTCATGGTGTTCTTGATAACTGGGATAGAGATGCCGTTGATCCTTGCAGCTGGACAATGGTC
ACTTGTTCTTCAGAAAACTTTGTCATTGGCTTGGGCACACCTAGTCAGAACTTATCTGGTACACTATCTCCAAGCATTACCAACTT
AACAAATCTTCGGATTGTGCTGTTGCAGAACAACAACATAACAGGAAAAATTCCTTTTGAGATTGGTCGGCTAACAAGGCTTGAGA
CTCTTGATCTCTCCGATAACTTCTTCCGTGGCGAAATTCCTCTTTCACTAGGCTATCTACGAAGCTTGCAATACCTGAGGCTTAAC
AACAATTCTCTCTCTGGAGTAATTCCTCTGTCCCTATCCAACATGACTCAACTTGCCTTACTAGATTTATCTACAACAATCTTTGT
AGTCCAGTCCCAAGGTTTGCTGCAAAGACCTTTAGCATCGTTGGGAACCCGCTGATCTGTCCCACTGGCAAGGAACCAGACTGCAA
TGGAACTACATTGATACCAATGTCTATGAACTTGAATGAAACTGGAGCTCCTTTATACGTCGGTAGATCAAAGAGGCACAAAATGG
CAATAGCCGTTGGATCCAGCGTTGGGATTGTATCATTGATCCTCATTGTTGTTGGGTTGTTTCTCTGGTGGAGACAAAGACATAAC
CAAACCACCTTCTCTGATGTCAAAGATGGGCATCATCATCATCATGAGGAAGTCTCACTAGGAAACCTGAGGAGATTCGGTTTCAG
GGAGCTTCAGATCGCTACTAACAACTTCAGCAGCAAGAACCTCTTGGGGAAAGGAGGCTACGGGAACGTATACAAAGGCACACTCG
CCGACAGCACCGTGGTCGCGGTGAAACGCCTCAAAGACGGTAATGCGTTAGGAGGAGAGATTCAGTTTCAGACAGAAGTCGAGATG
ATCAGTTTAGCCGTTCACAGAAACCTCTTGAGACTCTACGGTTTCTGCATCACGCAAGCCGAGAAGCTTCTGGTCTACCCTTACAT
GTCTAACGGAAGCGTAGCTTCCAGGATGAAAGCCAAACCGGTTCTTGACTGGAGCATCAGGAAGAGGATAGCCATAGGAGCCGCGA
GAGGGCTCGTGTATCTCCACGAGCAGTGTGATCCCAAGATCATCCACCGTGACGTCAAAGCAGCGAATATACTTCTTGATGACTAC
TGCGAAGCCGTGGTTGGTGACTTCGGTTTGGCTAAACTTTTGGATCACCAAGACTCTCACGTCACGACTGCCGTGAGAGGCACGGT
AGGTCACATCGCTCCTGAGTATCTCTCTACGGGTCAGTCCTCTGAGAAAACCGATGTTTTCGGGTTCGGGATTCTTCTCCTAGAGC
TTGTTACGGGCCAGAGAGCGCTCGAGTTTGGTAAAGCGGCTAACCAGAACGGAGCTATGCTCGAGTGGGTTAAGAAGATACACCAG
GAGAAGAAACTCGAGGTGCTTGTGGATAAAGAGCTGATGAAGGAGGAGAATAAGAAGAGCTACGATGAGATCGAGTTGGAGGAGAT
GGTGAGAGTGGCTTTGCTGTGCACGCAGTATTTGCCTGGACATAGACCGAAGATGTCTGAGTTGTAAGATGCTTGAAGAGATGGGC
TTGCGGAGAGATGGGAAGCTCTCAGGGAGATCAGAGAGTAGTGTTTCGAATGTGAAACAGTAGGGTGAATGAGTTGGTGTCGTCGT
CTTCGGATAGATACTCTGATCTTACTGATGACTCTACTTTACTTGCTCGAGCTATGGAGCTCTCTGGTCCTAGATGATGGACACAA
AAATCTGAAAAGGGTTGGTTTATGTTTCTTGAGTCTCAAGGATCCTTGTTTCTTCTATTTCTTTTTTTTTTAATTGTATAATATGT
TTTTTTTGTGGGAATGTTTTCTCTGTAATTGTATAGGTTAAATTTTTATTATGTAAGAAGTTTTGATTTACTGTACTTAGGAGTAG
TGGTCAGATCATAGTTGTTTTCTTGGATTTAATGTTTAGAATTTGGTTGGGAGATTCAAGTTTGAGAATGCAATTTATTAAATTTT
GTATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871697 nsp-interacting kinase 1 [Arabidopsis lyrata subsp. lyrata]19165e-212
NP_197104 NSP-interacting kinase 1 [Arabidopsis thaliana]19131e-211
AAM65586 receptor protein kinase-like protein [Arabidopsis thaliana]19121e-211
ABD96874 hypothetical protein [Cleome spinosa]18028e-199
ABD96908 hypothetical protein [Cleome spinosa]17661e-194

Swiss-Prot top hits (Blast detail)Scoree value
Q0WVM4 Probable LRR receptor-like serine/threonine-protein kinase At2g2395012154e-132
Q94F62 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 110821e-116
Q94AG2 Somatic embryogenesis receptor kinase 110811e-116
Q9XIC7 Somatic embryogenesis receptor kinase 210802e-116
Q9SKG5 Somatic embryogenesis receptor kinase 410523e-113

TrEMBL top hits (Blast detail)Scoree value
Q9LFS4 Leucine-rich repeat receptor-like protein kinase19137e-212
Q8LA44 Receptor protein kinase-like protein19121e-211
Q1KUW2 Putative uncharacterized protein18026e-199
Q1KUS8 Putative uncharacterized protein17668e-195
B9T3S1 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative17344e-191

Arabidopsis top hits (Blast detail)Scoree value
AT5G16000.1 NIK1 (NSP-INTERACTING KINASE 1); kinase19134e-214
AT3G25560.1 NIK2 (NSP-INTERACTING KINASE 2); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase14994e-166
AT3G25560.2 NIK2 (NSP-INTERACTING KINASE 2); ATP binding / protein binding / protein kinase/ protein serine/threonine kinase14994e-166
AT1G60800.1 NIK3 (NSP-INTERACTING KINASE 3); kinase13094e-144
AT4G30520.1 leucine-rich repeat family protein / protein kinase family protein13005e-143

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  25%
 
91  25%
 
72  50%

Unigene MembersMember information