 |
Information for unigene UN20898
| FASTA Sequence |
| Unigene ID: UN20898 | Length: 1707 |
SSR | | GCATATATACAATGGCTGCCGATATTGTCAGATTATGATGGCACATGATTGTTTTTCTTTTCTTCACGTTTTCTTTTTGAACATTT
TAAAAATTTGATCCCATCAAACAACACTGTAGCACCACTGATAACAACTATCTAAAGGACAACATGTTTTGCTTGCTACTTTTCTA
TACAAACTTCCCTCGAAAAATCCTTACTAAACTGGCTTTAAAGGCTTCTCCAACTCCACCCCAAAACGAATACTTTGACCCGTACA
ACCACAGGTTCACTGATTTCTTCCAACCTTCTCCTCTAGGAAACTCCATCTCAGCAGCAATGCTGGACTGCCCCCAATCTTCTTCA
CCGTCTTCCAAAAGCGGCAGCGCTTCATAACCACCAAACTCCAGGTGCTTGATCCACCCGCGCATCAAATAGTTCACCACCTCAGG
GACTTCATCGTGTGGGCAGTGACCAGCTGGGCTGATCTCGTAGTATGGAGCGTTAGGCAATTCCTTCTTTATCTTCTTTCCCCATA
TAGGTCCCACCCATGGATCTTCTCTTCCATACATTAAACATATCTGAACATTGTTTTCCTTACACCTAGATAAAGCTTCGGAGAAA
GATAGCTCTCCACCAGGAGCAAACATGATTGACGCAAACGACGCACCAGCGGCCGGGTGCTGCGTGATCTCCACAATACGTGAGAA
CACTTTATCCACATCGGTGGAATGGTCTTTGTACACCTGTTTAAGTATCTCAGCTATGCTTTCAGGATCACTTATCTTTTGCCACA
CCAATTCTGTGAGTTTTTTCACTCTTGGCGGTAAAGGGAAAGTTCCAGACCATGGAAAGAGACGTGCTAGCCGTGGGGAGCGTACT
GGATTAGGGAAGAAACCCCAGAAAGGTGTTGCGTTAAGCAACGTGACACCTTTGACCAGATGAGGATGGGTTGCTGCAAAGTAGAG
AGCTACATAGCCTCCAAGCGAGTTCCCTGCAATGTACACTGGCTCACCGATAACCTCTTCTACAATATACTGAACTTGTTCCCTCC
AGAGATCCAACGAGTATACAAGTTGATCAGCCCATGGCTTAGCTTCATCACCAAAACCCCAAAACGGTTCCTTAACTCCCAAGACA
CTTGTTTCTTCAGACAAGGTAGTACTAGTACTAGTAGTAGTAGTAGTAGTAGTGGGATCTTGAGTGGGGAGAGACAAACCCTGTCC
AACAAAATCAACCGCCCAAACTCGATAATCCCTTCCCAAATCCGCAAGCTGTTTCTCGTAGTGGAAAGAACCAACACCAAATCCAG
GAAGAAGCAACACCGCGGGAGCCTCCACGTTGCCACAGCCGGATTTCTCGTAGTGTACAGTGAGGTTAGGCTTCCACTCGCACCGA
GAAGTAGTGATTCTAGCTGCGTCGCCGTTTGATTGGTCAGGCAGACCAGGAATCAAAACCTTTGATTTAGAGTCTCCTCTTCTGGT
AGCTATACTACCCAAGTCATCATTATCACCGACCACGTAACCATCTGAGGTTCCGTTTCGAATCACAAGTCTTGATTTCCTGATCC
CACCACTAGATAATAAGATGTTCGATCGATTCGGGACCAATCTGTTACTACCACTCCAAGTCACGAGAGAGCAGTGAGGCAGGAAG
TTCTGTGAGATTATCTCCATAACAAAATCAAAAACAATCCTCTCTTTCAGATTCGGGATGGTAGAAGCTTCCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873628 hydrolase, alpha/beta fold family protein [Arabidopsis lyrata subsp. lyrata] | 2063 | 3e-229 |
| NP_196884 pheophytinase [Arabidopsis thaliana] | 1503 | 3e-164 |
| AEK97330 chromoplast alpha/beta fold family protein [Brassica rapa var. parachinensis] | 1427 | 2e-155 |
| CAO99125 putative esterase [Nicotiana tabacum] | 1402 | 1e-152 |
| BAJ96082 predicted protein [Hordeum vulgare subsp. vulgare] | 1278 | 3e-138 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FFZ1 AT5G13800 protein | 1503 | 2e-164 |
| A7WPL1 Putative esterase | 1402 | 1e-152 |
| B4FZ64 Putative uncharacterized protein | 1134 | 1e-121 |
| B6TI01 Hydrolase, alpha/beta fold family protein | 1134 | 1e-121 |
| B9HNV3 Predicted protein | 1134 | 1e-121 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13800.2 hydrolase, alpha/beta fold family protein | 1503 | 1e-166 |
| AT5G13800.1 hydrolase, alpha/beta fold family protein | 1503 | 1e-166 |
| AT4G36530.1 hydrolase, alpha/beta fold family protein | 254 | 7e-022 |
| AT4G36530.2 hydrolase, alpha/beta fold family protein | 254 | 7e-022 |
| AT5G38520.1 hydrolase, alpha/beta fold family protein | 195 | 5e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
