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Information for unigene UN20901
| FASTA Sequence |
| Unigene ID: UN20901 | Length: 873 |
SSR | SNP | ACATCTGAAATATCTACCGTTATTATTCTTGTCTCTTGCTTTAACGTTATGATTTTTTTCAAATAAAGATTCACATGATTGTTAAA
TAAGAGTACAAAAACATAAGACAAACTGATAAAACTTTCAAATATTTTTGTTCTCTTGACCTTTTTATGCCGAACTACAAGTGCAG
CGAAAGAGTCATTGAATAAGAAGAAAGAATAAACTAAGTAAAAAGCTAAAGTCTCTGCATTTAAAAGCAGAGAAGCTTTTTTCGAG
AGTAAACACATTATTCGACATTTCATTCTTATTTCATCCTTTTAATCATCACCTTTCTCTTTCAAGTTTTCTCCCAAGTCTTTTCC
TCAAACAAAATGTTGTTCCATCATCATCATCATACCGCCTTTTGTTGCAACTCAGCAGCACTAACACCAACAGCTTCATCAGGTAT
AAACCTTCCCCAGAACCAGTGTGCCTTCCACACTCTGTTCATCTCTTCGATTGGTACATTCTTCGTCTCAGGCAACATCAAGTAGA
TGAATATCGTCATTATGAAGACAAACACCGCAAAGAAGAAGAATAGTCCAAACTTCATGTGACAGAGCATTGTGAGGAAGAGCTGA
GCTACAAGGAATGTGAAGAACATGTTGACCGCTACGTTAATGGCTTGTGCTGCTGATCGGATCTCTAGAGGAGATATCTCACTAGG
TACCAGCCATCCCAACGGTCCCCATGACCAGGCGAAACCCGCTACATAGATGCAGATCAGTGCCACGATTACATTAGCATCGGTTT
TCCCTATGTTCCCTGTTCCAGCTGTTCCAAATTTGACTCCAATCATGATTCCAATAGCGATCTGAGAGATAAGCATTTGGATACCT
CCCTGGAGGACAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_188627 sugar transport protein 4 [Arabidopsis thaliana] | 800 | 3e-083 |
| XP_002883211 hypothetical protein ARALYDRAFT_898390 [Arabidopsis lyrata subsp. lyrata] | 799 | 4e-083 |
| XP_002520406 sugar transporter, putative [Ricinus communis] | 645 | 3e-065 |
| XP_002310644 predicted protein [Populus trichocarpa] | 644 | 4e-065 |
| XP_002306376 predicted protein [Populus trichocarpa] | 633 | 8e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39228 Sugar transport protein 4 | 800 | 2e-084 |
| Q9LT15 Sugar transport protein 10 | 609 | 2e-062 |
| Q9SX48 Sugar transport protein 9 | 603 | 1e-061 |
| Q9FMX3 Sugar transport protein 11 | 594 | 1e-060 |
| O65413 Sugar transport protein 12 | 569 | 9e-058 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S337 Sugar transporter, putative | 645 | 2e-065 |
| B9HGG0 Predicted protein | 644 | 3e-065 |
| B9H5Q5 Predicted protein | 633 | 5e-064 |
| B9HGG1 Predicted protein | 620 | 2e-062 |
| C5X761 Putative uncharacterized protein Sb02g000650 | 595 | 1e-059 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G19930.1 STP4 (SUGAR TRANSPORTER 4); carbohydrate transmembrane transporter/ monosaccharide transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter | 801 | 1e-085 |
| AT3G19940.1 sugar transporter, putative | 609 | 2e-063 |
| AT1G50310.1 STP9 (SUGAR TRANSPORTER 9); carbohydrate transmembrane transporter/ sugar:hydrogen symporter | 603 | 1e-062 |
| AT5G23270.1 STP11 (SUGAR TRANSPORTER 11); carbohydrate transmembrane transporter/ sugar:hydrogen symporter | 594 | 1e-061 |
| AT4G21480.1 carbohydrate transmembrane transporter/ sugar:hydrogen symporter | 567 | 1e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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