Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN20903

FASTA Sequence
Unigene ID: UN20903Length: 1221  SNP
GAGTGACGGACATATTTTTGTTCGTAAATTAATATTTAAGAGTTTTTTTTTGAATGAAACAAATTTTCCTTGTTAAATAAAGGGAC
AATTAAGTTAAAAACAAATATCCCTTATATATATCAACAAAAGAAAATGAATGGTTTCGAGTATATATTATCCCTATACTGTTCCA
AGCAAGGCAAGGCTGTAAGGAAAAGCAACGATTCCGGCAAAAGCAGCCTTTGCCAGAAACATGTTGGCCCTCTCAGTGCTGTGGAC
ACTGTCCCAGTACACGTACCGGTTTCGAAACGCACAAACCGGTTTATCCGCCGCACATAGCTCTTCCCCTGATTCGACGGTACAAC
AACTCTTTTGTGTTACAGCAAACCCTAAGGAAGCATACGCAAGAGGAGTTTGCCCGGAGTACATATCGACAAAAGTGAACTTAGCA
TCGCCGAAGTTAGTGTTGAACTCTCTGACCAGAGCTTTAAGTTTCATGTTGAAAGGTTCAACTGCTTTGTTCACTTCAGCGGCACA
GCCCATACCCCCACCATGGGAGGCAATCATCCGCGGCGTGCACCCTAGTTTACTGACCCCAAACAACGCCACCCTCCTTGCTCCTT
GGACATACAACAACTTCAGAAAAGAGCGATAACGTCGAATGAGGGAATCAGCAAATTGATCGTAAGTGTACTTGCGTTGTGTATTG
TACTTATCACCTTGCATGAAGTAGTTGTTAAGATAATCATTGCTTCCTATATTAATAGTGTATAGACATTGATTCAGCTTCTCCGG
GGGCACATTTGCAGTCATAATCGCCGTCCGATGGTTCTTTATTTGCGTTTTAAAACTGATTCTACCACCCAGATGGTAGCTAGTAT
CTTCGAGAATTCCCGCGCCGCCAGAAGCGTAATTTAAGCCGATGTGAGCTTGTTCCGGGGATGCTCCGGTGAAAGGTGGAATGTAA
TCACTGAATCTCATTAGTTCAGAAAGCAGAAGAGGCTTTTTGGAAGCAAAGAAGCAGACAACTCTGGCTCACCCTTGGAGATTCCA
ACACAGGCTTTTTCCATGCTGCCACCAAACGCAGGAAAGCCCGAAACCATCTCACTGTCATAGTGGATGACGAAGAGAAACCTTTT
TATGAGGAAAAGCAAATCGCGGAGATCATTAGTGGATTTTATGAAAAGCTCTTCATATCATCTTCTCAATCCATCGGATAAGGCTT
CGGGCCCCGATGGATTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179495 GDSL esterase/lipase [Arabidopsis thaliana]10613e-113
XP_002886244 GDSL-motif lipase/hydrolase family protein [Arabidopsis lyrata subsp. lyrata]10579e-113
ACC68162 putative GDSL-motif lipase/hydrolase family protein [Arabidopsis halleri subsp. halleri]10481e-111
XP_002886243 GDSL-motif lipase/hydrolase family protein [Arabidopsis lyrata subsp. lyrata]9735e-103
ACC68163 putative GDSL-motif lipase/hydrolase family protein [Arabidopsis halleri subsp. halleri]9654e-102

Swiss-Prot top hits (Blast detail)Scoree value
O64468 GDSL esterase/lipase At2g1905010611e-114
O64469 GDSL esterase/lipase At2g190609581e-102
O65921 GDSL esterase/lipase At2g190108201e-086
Q9SZW7 GDSL esterase/lipase At4g301407563e-079
Q9C7N4 GDSL esterase/lipase At1g296704947e-049

TrEMBL top hits (Blast detail)Scoree value
B2Y4P7 Putative GDSL-motif lipase/hydrolase family protein10487e-112
B2Y4P8 Putative GDSL-motif lipase/hydrolase family protein9653e-102
B2Y4P4 Putative GDSL-motif lipase/hydrolase family protein (Fragment)8452e-088
A2WV19 Putative uncharacterized protein5397e-053
Q94J26 Putative proline-rich protein5397e-053

Arabidopsis top hits (Blast detail)Scoree value
AT2G19050.1 GDSL-motif lipase/hydrolase family protein10629e-116
AT2G19060.1 GDSL-motif lipase/hydrolase family protein9581e-103
AT2G19010.1 GDSL-motif lipase/hydrolase family protein8201e-087
AT4G30140.1 GDSL-motif lipase/hydrolase family protein7563e-080
AT1G29670.1 GDSL-motif lipase/hydrolase family protein4955e-050

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
115  56%
 
103  33%
 
121  11%

Unigene MembersMember information