 |
Information for unigene UN20927
| FASTA Sequence |
| Unigene ID: UN20927 | Length: 1021 |
SSR | | GGAGAGACCGGTTCTTGAGATGGAGGATTCAGTTTCTTGAGAAGAGTATAAGGAAGCTAGATTTTGTCGCTGGTGGGGTTTCCACG
GTCTGTCAAGTAAACGATCTGAAGAACTCTCCAGGACCTGGTAAAACCGAGCTCAGGGTAGCTACTAAGCAAGCTCTTCATCTTCT
TCAAGACAATTACCCTGAGTTTATCTCTAAACAGATATTCATCAACGTTCCATGGTGGTACCTTGGGTTCTATAGGATTATCAGCC
CTTTCATGACCCAAAGGTCAAAGAGCAAACTCGTTTTCTCAGGTCCTTCAAGATCTGCAGAAACACTTTTCAAGTACATATCACCA
GAACATGTCCCGGTTCAGTACGGTGGATTAAGTGTGGATAACTGCGACTGCAACTCGGATTTCACACATGAGGATACCGCCACTGA
GATTACCGTTAAACCAACAACCAAACAAACCGTCGAGATTATTATTTACGAGAAATGCACGATCGTGTGGGAGATAAGAGTAGTGG
GATGGGAGGTTATGTATGGAGCAGAGTTTGTGCCGGAGAACAAAGAAGGATACACGGTGATAATTCAGAAGCCGAGGAAGATGGGT
TCAGAAGATGAACCGGTTGTGTCTCAAAGCTTCAAAGTTGGAGAAGTTGGCAAGATTTTACTAACCGTGGATAACCCGACGTCCAA
CAAGAAAATTCTTATTTACAGGTTCAAGGTTAAGCCTTTGCCGTGTGAGTAACAAAAGTTGCATCTATCTTCAAAATGTTTCTTAG
TTTAGAACTCGATCAAATGATTGTTGGTTGTGTTTCTTTTTTTCTGTTGCCGACTTATATGTGTGTGTGTGTGTTCTGTTTGTTAA
ATTCGTTTGTTTTAGATTTGTATTTTGCTTTAGTATCTCTTTAATCTTCTTCCAAGAGGATGATGTTTTGAGTAGTAAATGGCTTT
TAATGGATACAGCTTTTTTGTTGGTCAGGAATTAAGTCTCCAGTGCAGATTGTTAAGAAAAACAGTTGATTGCTG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002872438 SEC14 cytosolic factor family protein [Arabidopsis lyrata subsp. lyrata] | 1205 | 5e-130 |
| NP_192655 patellin-5 [Arabidopsis thaliana] | 1188 | 4e-128 |
| XP_002521798 Patellin-5, putative [Ricinus communis] | 1009 | 3e-107 |
| XP_002327362 predicted protein [Populus trichocarpa] | 1005 | 7e-107 |
| XP_002325536 predicted protein [Populus trichocarpa] | 1004 | 1e-106 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S729 Patellin-5, putative | 1009 | 2e-107 |
| B9MWE2 Predicted protein (Fragment) | 1005 | 5e-107 |
| B9IQE9 Predicted protein | 1004 | 7e-107 |
| B7FL90 Putative uncharacterized protein | 964 | 3e-102 |
| A5ASS0 Putative uncharacterized protein | 949 | 2e-100 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G09160.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | 1189 | 1e-130 |
| AT1G72160.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | 999 | 1e-108 |
| AT1G22530.1 PATL2 (PATELLIN 2); transporter | 631 | 7e-066 |
| AT1G72150.1 PATL1 (PATELLIN 1); transporter | 614 | 6e-064 |
| AT1G30690.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | 610 | 2e-063 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
