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Information for unigene UN20930
| FASTA Sequence |
| Unigene ID: UN20930 | Length: 759 |
SSR | | GGAGAGAGAGAGAGAGAAAAGAAGAGAGGTGAAAGATCATCGACCACGGAGCAAGCGGCGATTTGTGTGAGAGAGCAGACTCGAGG
AATTGTCAATGTCTCCTCTCGCAATCTTCCACCGTCTTGCTCACGCCACGTACTCCTCCCTTCTCCTCTCAATGTCTCAAGTTCGA
AGCTTTGAAGCGTCTACTACATGGGAAGATATCGTTACCCGAACCGGCCTCTGGTGGGAGCAAGCGAGGGGTTTAGTGGTTGTGCC
TGTCTTCAAGTTTCTTGTGGCTCTGTGTTTGATCATGTCTGTGATGCTCTTCGTTGAGATGATGTACATGGGACTTGTGGTAGCGT
TTATCAAGCTGTTCAAGAGGAAGCCAGAGAAAGTTTACAAATGGGTAGCTATGGATGAGGATGATGTTGAGTGTGGCGGTGAAAGC
TTCCCTATGGTTCTTGTGCAGATTCCCATGTACAATGAAAAAGAGGTTTGTGAGCAATCAATTGCAGCTGCTTGCAAAATCTCTTG
GCCGTCGAGTCGTATAATAATTCAAGTGCTTGATGACTCCACTGATCCAGCTAGTAAGGAAACTGGAACTGGTGAAAAAGGAGTGT
GAGAGATGGTCTAAAGAAGGTGTGAACATAACATTCGAGATAAGGGATAACAGGAAAGGATACAAAGCTGGTGCGCTGAGAGAAGG
GATGAAGCATAGCTACGTGAAGCAGTGTGACTATGTTGCTATCTTTGATGCTGATTTCCAGCTGAGCCTGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM61171 putative glucosyltransferase [Arabidopsis thaliana] | 638 | 2e-064 |
| NP_565813 putative mannan synthase 7 [Arabidopsis thaliana] | 637 | 2e-064 |
| XP_002879565 hypothetical protein ARALYDRAFT_482526 [Arabidopsis lyrata subsp. lyrata] | 635 | 3e-064 |
| XP_002890585 hypothetical protein ARALYDRAFT_889889 [Arabidopsis lyrata subsp. lyrata] | 430 | 2e-040 |
| NP_850952 putative mannan synthase 3 [Arabidopsis thaliana] | 424 | 1e-039 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZQN8 Probable mannan synthase 7 | 637 | 1e-065 |
| Q9LQC9 Probable mannan synthase 3 | 424 | 5e-041 |
| Q9T0L2 Probable mannan synthase 15 | 404 | 1e-038 |
| Q84W54 Probable mannan synthase 1 | 398 | 5e-038 |
| Q9LR87 Probable mannan synthase 10 | 390 | 4e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C8YZA8 UPA15 | 388 | 1e-035 |
| A2X1X3 Putative uncharacterized protein | 347 | 6e-031 |
| B7ETH8 cDNA clone:J033103E20, full insert sequence | 347 | 6e-031 |
| A2X1Y0 Putative uncharacterized protein | 331 | 4e-029 |
| B4FBD8 CSLA1-cellulose synthase-like family A; mannan synthase | 331 | 4e-029 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G35650.1 ATCSLA07 (CELLULOSE SYNTHASE LIKE); mannan synthase/ transferase, transferring glycosyl groups | 637 | 9e-067 |
| AT1G23480.1 ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3); cellulose synthase/ transferase, transferring glycosyl groups | 424 | 4e-042 |
| AT1G23480.2 ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3); cellulose synthase/ transferase, transferring glycosyl groups | 424 | 4e-042 |
| AT4G13410.1 ATCSLA15; cellulose synthase/ transferase, transferring glycosyl groups | 405 | 7e-040 |
| AT1G24070.1 ATCSLA10; cellulose synthase/ transferase, transferring glycosyl groups | 390 | 4e-038 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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