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Information for unigene UN20941

FASTA Sequence
Unigene ID: UN20941Length: 1605 SSR 
CATTTTTGGATTCTTATTTATATTTGTTGGGTGGTTTGGCTCTACTCTACTCCCATAAGCCACCGAAAGTGTTTTTAGGGTTTTTC
GAGAGATCTCTCTTTCATTTTCAATGGCCTCCTCTTCTCTCCTCAGATCCGCCGCCGCTGTTCCTCGCCCTGACCTTTTCTCGTCG
CCGTCGTGTGATCACTCTAAGGTGTCTGCAAGTCTTGGATTCAATCGCAGCCTCACATCATCAAGATTTTCTGGTGCTGCTGGAAC
ATCATTGTCTCTACAAAGATGCAATGTAACAAGTGTGCAACCCATCAAGGCCACGGCTACGCAAGTTCCACCTGCACTTCAAAGGT
CAAGTAGCACTGGCAAGACTAAGGTTGGGATCAACGGTTTTGGTCGGATTGGAAGGTTGGTTCTCCGTATTGCAACATCCAGGGAT
GATATTGACGTTGTGGCAGTCAATGACCCTTTCATTGACGCCAAGTACATGGCTTACATGTTGAAGTACGATTCTACTCATGGAAA
CTTCAACGGAACCATCAATGTCATTGATGATTCTACTTTGGAGATCAATGGGAAGAAGGTCAATGTTGTCAGCAAGAGAGACCCAG
CTGAGATCCCTTGGGCTGATCTTGGAGCTGATTATGTTGTTGAGTCGTCAGGTGTATTCACCACCCTGTCAAAGGCTGCATCCCAT
TTAAAGGGTGGTGCAAAGAAAGTAATCATCTCTGCCCCTTCAGCTGACGCGCCCATGTTTGTTGTTGGTGTAAATGAGAAGACATA
CCAACCAAACATGGATATAGTCTCCAATGCTAGTTGTACCACCAATTGTCTTGCTCCTCTTGCTAAGGTGGTGCATGAGGAATTTG
GTATTCTTGAAGGCTTGATGACAACTGTCCACGCAACCACTGCTACTCAAAAAACTGTTGATGGACCATCTATGAAGGACTGGAGA
GGAGGGCGAGGAGCTAGTCAAAACATCATTCCTAGCTCAACCGGTGCTGCCAAGGCTGTAGGTAAAGTTCTGCCAGAACTGAACGG
GAAACTTACGGGAATGGCATTCCGTGTACCAACACCAAATGTTTCCGTTGTGGATTTAACCTGTAGGCTTGAGAAAGGTGCCTCTT
ACGAAGATGTTAAAGCGGCCATTAAGTATGCCTCGGAAGGACCTCTAAAAGGCATTCTCGGGTACACAGATGAAGATGTCGTCTCC
AATGACTTCGTGGGTGATTCAAGGTCAAGTATCTTTGACGCCAATGCTGGGATTGGATTGAGCAAGTCCTTTGTGAAACTTGTCTC
TTGGTACGACAATGAATGGGGTTACAGCAACCGAGTGCTTGACCTTATAGAGCACATGGCTTTGGTAGCAGCCAGCCGCTAAGCAT
GCACGCACACACACACACACCGGTTCTTGCAGAAGGACTTTCTACTTATTTTCTCACCTTCTACAAAGGCGGTTTGGTTCTGTTAG
GTGCTAGATCTTTTAATGTTTGGTTTGGTTCCTTCTTTTTGGTTCTGTTTCAGTATCTGCAACTACGAGAAAGGAAAAAACATAGA
GATTTGGTGTAATAGACTACTGTCATTTATCAATAAGCATTAATTCTTTGCAAACCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889251 GAPCP-1 [Arabidopsis lyrata subsp. lyrata]19567e-217
NP_178071 glyceraldehyde 3-phosphate dehydrogenase [Arabidopsis thaliana]19333e-214
NP_173080 glyceraldehyde 3-phosphate dehydrogenase [Arabidopsis thaliana]18635e-206
XP_002890157 GAPCP-2 [Arabidopsis lyrata subsp. lyrata]18635e-206
AAM67077 putative glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis thaliana]18601e-205

Swiss-Prot top hits (Blast detail)Scoree value
Q42671 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic12951e-141
Q39769 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic12843e-140
P32637 Glyceraldehyde-3-phosphate dehydrogenase12824e-140
P54118 Glyceraldehyde 3-phosphate-dehydrogenase12816e-140
P34924 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic12744e-139

TrEMBL top hits (Blast detail)Scoree value
Q9SAJ6 Putative glyceraldehyde-3-phosphate dehydrogenase19332e-214
Q5E924 At1g1630018633e-206
Q8L8W7 Putative glyceraldehyde-3-phosphate dehydrogenase18607e-206
Q84WR0 Putative glyceraldehyde-3-phosphate dehydrogenase18581e-205
B9HI47 Predicted protein17291e-190

Arabidopsis top hits (Blast detail)Scoree value
AT1G79530.1 GAPCP-1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase19341e-216
AT1G16300.1 GAPCP-2; NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase18641e-208
AT3G04120.1 GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1); glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase12592e-138
AT1G13440.1 GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2); NAD or NADH binding / binding / catalytic/ glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ glyceraldehyde-3-phosphate dehydrogenase12539e-138
AT1G42970.1 GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT); glyceraldehyde-3-phosphate dehydrogenase (NADP+)/ glyceraldehyde-3-phosphate dehydrogenase8326e-089

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
182  22%
 
202  22%
 
81  11%
 
112  22%
 
92  22%

Unigene MembersMember information