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Information for unigene UN20942
| FASTA Sequence |
| Unigene ID: UN20942 | Length: 1382 |
| SNP | CAAAATAAATACATCTCAGTCGTCTTCTTCTAAAATTCGTTGCTAGTAAATTGATCGACCAGTCACCACCTCGACCAGCGAAAATG
GACGTGCGCCAATCAATCTCACTGCAAAACCATGTCTCCATGAGCCTCGCCAAGAACGTGATCTCCACCGTCTCTAAACCCTCCAA
CGTCATCTTCTCCCCGGTATCGATCAACGTCGTCCTCGGCATAATCGCCGCCGGATCCACCGGCGCAACCAAAGACCAGATCCTCT
CTTTCCTCAACTTCCCTTCGATCGATCATCTCAACACCTTCTCCTCCGATATCGTCTCCGCCGTCCTCGCCGACGGCAGCGCTAAC
GGCGGACCTAAACTCTCGGCGGCTAATGGCGTCTGGATCGATAAGTCTCTGTCCTTCAAACCTTCCTTCAAGCAGCTCTTGGATGG
TTCTTACAAAGCTGCTTCTAACCAAGCTGATTTTCAGACAAAGGCTGTGGAAGTGATTTCCGAAGTGAATTCATGGGCTGAAAAGG
AGACGAATGGTCTCATCACTGAGGTTCTACCGGAAGGATCAGCAGACAGTATGACCAAACTGATATTTGCAAATGCTTTGTACTTC
AAGGGAACATGGAACGAGAAGTTCGACGAATCGCTGACGGAAGACGGAGACTTTCACCTTCTCGACGGTAGTTCCAAAGTGACTGC
TCCGTTTATGACCAGCAAGAAGAAACAGTACGTGAGTGCTTATGATGGTTTCAAAGTGTTGGGGCTTCCTTACTTACAAGGACAGG
ATAAGAGACAGTTCTCGATGTACTTGTATCTTCCAGATGCAAACAACGGTTTGTCTGATCTTCTCGATAAGATAGTTTCCAATCCT
GGGTTCTTGGATAGCCACATTCCACGCAGACAAGTTAAGGTCGGCGAGCTCAAGATCCCCAAGTTTAAGTTCTCTTTCGGGTTCGA
AGCTTCGGATGTTTTGAAAGGACTGGGACTGACTTCACCCTTCTCTGGTGAAGATGGTCTGACTGAGATGGTTGAGTCTCCAGAGA
TGGGGAAGAATCTAAAGGTACCAAGAATTTTCCACAAAGCGCGTATTGAGGTGAATTAAGAAGGAACTGAAGCTGCTGCTGCGTCA
GCTGCAGTAATAAAGCTAAGGTCTTTGGCTGTGGAGGAAGAGATTATAGATTTTGTGGCGGACTATCCGTTTCTGTTGGTGGTCAT
GGAGAACATAACAGGAGTGATTCTGTTTATTGGTCAAGTCATTGATCCGTTGCATTGATCTTGCTTTTACCTGAGAGTAATCAAAT
AAAATGTGAGTTGTGGTTTGAGGACTTTTTTCCTGCTACATCCTTTGTTTAACTTTGATGTGTGCAATAATAATACATACTTTCTT
TTTCAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| 3LE2 Chain A, Structure Of Arabidopsis Atserpin1. Native Stressed Conforma | 1720 | 1e-189 |
| NP_175202 serpin-ZX [Arabidopsis thaliana] | 1718 | 2e-189 |
| XP_002891380 hypothetical protein ARALYDRAFT_891566 [Arabidopsis lyrata subsp. lyrata] | 1698 | 5e-187 |
| XP_002510281 Protein Z, putative [Ricinus communis] | 1296 | 2e-140 |
| XP_002326917 predicted protein [Populus trichocarpa] | 1246 | 1e-134 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9R7I8 Protein Z, putative | 1296 | 1e-140 |
| B9MVJ6 Predicted protein | 1246 | 9e-135 |
| Q8GT65 Serpin-like protein (Fragment) | 1231 | 5e-133 |
| A5AT46 Putative uncharacterized protein | 1229 | 8e-133 |
| Q5GN36 Serpin (Fragment) | 1175 | 2e-126 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G47710.1 serpin, putative / serine protease inhibitor, putative | 1719 | 7e-192 |
| AT2G25240.1 serine-type endopeptidase inhibitor | 1031 | 4e-112 |
| AT3G45220.1 serpin, putative / serine protease inhibitor, putative | 1027 | 1e-111 |
| AT2G26390.1 serpin, putative / serine protease inhibitor, putative | 1015 | 3e-110 |
| AT1G64030.1 serpin family protein / serine protease inhibitor family protein | 783 | 2e-083 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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