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Information for unigene UN20982
| FASTA Sequence |
| Unigene ID: UN20982 | Length: 1414 |
SSR | | GGGTATTGGCTCTCTTCTCTCCTCTGTTACAACAAGTGTGAAACAAAGACGAGTCTAAGACGCATTTTCGCGAGATCAGAAAGAAT
CAATGGTGGCATGATCGAAGAAGACGACGCTCGAGCTCAAATTCGTCGACTATGGAACCCGCAGCTCTCACTCGCTCTTCCTCCTC
TCTTACTAGATTCTCTTACCGTCGCGGTTTAGCCACTCTTCGACTCGCTCGAGTCAACTCCTTCTCAATCCTCCCACCTAAGACTC
CTCTCCCTCTTCGGATCTCCTCCTCCCTTAGTCTTCCGCGTCAATCGATTCGTCTGCGCGCGGTTGAAGATCACCATCACGATCAT
CATGATAGTGAGCAAGAGCATCATCAACATCATCATCATCATCACCACCACGGATTCTGTTCTGTGGAATTGAAAGCGGAGAGTAA
GCCTCAGAAAGCATTGTTCGGATTCGCTAAAGCCATCGGATGGGTTCGATTGGCCAATTTCCTCAGGGAGCATTTTCATCTCTGCT
GCTCCTCCGCCGCACTCTTCATTGCCGCCGCCGCGTGCCCTTTCTTTGCTCCTAAATCTTACGTTAAGACTCTTCAGAACGCGTTA
ATGATTGTTGGCTTCCCTCTCGTTGGAGTTTCAGCGTCTCTTGACGCGCTTATGGATATAGCTGGAGGGAAAGTGAACATCCATGT
ATTGATGGCACTTGCTGCTTTTGCTTCCGTGTTTGTGGGCAACGCTCTTGAAGGAGGGCTGCTTCTTGCCATGTTCAATCTTGCTC
ACATCGCGGAGGAGTTTTTCACTAGTCGGTCAATGGTGGATGTTAAAGAGTTGAAGGAGAGTAATCCAGATTCTGCACTCTTGATC
CAAGTGAAAAATGGGAATGTTCCAAACATTTCTGATTTGTCATACAAAAGCGTTCCTGTGCACAGTGTAGAAGTTGGATCCTACAT
CTTGGTTGGAACTGGTGAGATTGTTCCTGTAGATTGCCAAGTCTACCAAGGTAGTGCTACCATAACAATTGAGCACTTGACTGGGG
AAGTCAAACCATTGGAGGCCAAAGCTGGAGATAGAGTGCCTGGTGGTGCAAGAAATTTGGATGGCAGAATGATCGTGAAGGCCACT
AAGGCATGGAATGAGTCGACTCTAAACAGGATTGTACAGCTGACAGAGGAAGCACACTCCAATAAACCCAAACTTCAGAGATGGCT
GGATGAGTTTGGGGAGAATTATAGCAAGGTGGTGGTTGTTTTGTCACTTGCTATTGCCTTCCTAGGTCCACTTTTGTTCAAGTGGC
CTTTTCTAAGCACCACAGCATGCAGAGGATCGGTCTACAGAGCATTGGGACTTATGGTGGCCGCATCACCATGTGCTTTGGCTGTT
GCTCCATTGGCTTACGCTACTGCTATTAGCTCTTGTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB90352 putative metal ATPase [Arabidopsis thaliana] | 1995 | 2e-221 |
| NP_195444 putative cadmium/zinc-transporting ATPase HMA1 [Arabidopsis thaliana] | 1991 | 6e-221 |
| AAY34978 chloroplast heavy metal P-type ATPase precursor [Arabidopsis thaliana] | 1987 | 2e-220 |
| XP_002866960 hypothetical protein ARALYDRAFT_490893 [Arabidopsis lyrata subsp. lyrata] | 1841 | 1e-203 |
| XP_002524927 heavy metal cation transport atpase, putative [Ricinus communis] | 1469 | 2e-160 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M3H5 Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic | 1991 | 2e-222 |
| Q59998 Zinc-transporting ATPase | 311 | 1e-027 |
| Q60048 Probable cadmium-transporting ATPase | 294 | 1e-025 |
| P37617 Lead, cadmium, zinc and mercury-transporting ATPase | 264 | 4e-022 |
| O32219 Cadmium, zinc and cobalt-transporting ATPase | 255 | 5e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q49HL5 Chloroplast heavy metal P-type ATPase | 1987 | 1e-220 |
| B9SG08 Heavy metal cation transport atpase, putative | 1469 | 1e-160 |
| B8B1T9 Putative uncharacterized protein | 1247 | 7e-135 |
| Q654Y9 Os06g0690700 protein | 1246 | 9e-135 |
| B4FW89 Putative uncharacterized protein | 1162 | 5e-125 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G37270.1 HMA1; ATPase/ cadmium-transporting ATPase/ calcium-transporting ATPase/ copper-exporting ATPase/ zinc transporting ATPase | 1991 | 2e-223 |
| AT2G19110.1 HMA4; cadmium ion transmembrane transporter/ cadmium-transporting ATPase/ zinc ion transmembrane transporter | 210 | 7e-017 |
| AT4G30110.1 HMA2; cadmium-transporting ATPase | 200 | 1e-015 |
| AT4G30120.1 HMA3 (HEAVY METAL ATPASE 3); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism | 194 | 5e-015 |
| AT5G44790.1 RAN1 (RESPONSIVE-TO-ANTAGONIST 1); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism / copper ion transmembrane transporter | 193 | 6e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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