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Information for unigene UN20984
| FASTA Sequence |
| Unigene ID: UN20984 | Length: 1344 |
SSR | | TTTTTCTCTCACTAGCCTTCGTCTCATCTCTCTTTCTCTCTCTCTGTAAACCATCTCCGTACGCAGGCTCTCTCATCTCTTCCTCT
CTACCTTTCCCTAAAACATTTTCAGTTCACACACACACACACACGGAAGCGTTTGACACTTAAAAATGGAAACTTTGAGTCGTTTC
TTAGTGTTCATATCTCTGTTCTCCGGTTTAGTTTCTGGTTTTACTCTGCAGAATCTTCCAATCACATCCTTTGAAGAGAGTTACAC
GCAACTTTTTGGTGACAAGAACTTGTTTGTTCATAAAGACGGCAAATCCGTCCGGTTAACGCTCGATGAATGGACCGGTTCTGGGT
TCGTCTCAAATGATCTTTATTTACATGGATTATTCAGTGCTTCAATCAAACTACCTTCTGATTATTCAGCAGGAGTAGTTGTTGCT
TTTTATATGTCAAATGGAGATACGTATGAGAAAAATCATGATGAGATTGATTTTGAGTTTCTTGGTAACATTAGAGGAAGAGAATG
GAGGATTCAGACAAATATTTATGGTAATGGAAGCACTCATTTGGGAAGAGAAGAAAGATGTAATCTTTGGTTTGATCCTACTGAAG
ATTATCATCAATACAGTATCCTCTGGTCTGATTCTCACATCATATTCTACGTAGACAATGTTCCTATCAGAGAGGTGAAGCGAACA
TCATCAATGGGCGGTGACTTCCCTTCGAAGCCCATGTCTCTCTACACAACAATATGTACGGTTCTAAATGGGCAACTAACGGTGGA
AAATACGGTGTAAACTACAAATATGCGCCTTACATCGCACGGTTCTCTGACCTAGTCCTGCATGGCTGCCCTGTGGACCCAATCGA
GCAGTTTCCGAAGTGCGACGAAGGAGCCACCGAGTATATCCGTGCGGCGCAGGAGATTAGCCCGTCACAGAGGGCTAAAATGGAGG
TTTTCAGGCGTAAACACATGACTTATTCGTATTGCTATGATCGGACCAGGTACAAGGTTTCTTTGCCGGAGTGCGTTTTGAATCCA
GCAGAGGCTCAGCGGCTTAGGGTTTATGATCCAGTCACGTTTGGTGGTATTCCGAGGCGCCGCCGCAGCGGAAAGCACAGGAGCAA
GAGAAGCCGTATGGATGGAATAGAGTCGATATGATTGATTGTACATTGTCATTAAATTATGGTGTTGGTTTGGATGGGGGAGGGGT
TTCTAAAATAAGTCTTTTTATTGGTATACTTTTGTTACAATGCATTTTTTGTTATTCACAGTTAGAGAGAGAGAGAGAGAGAGAGG
GGGGGGGGAGTTTTGTTCATTTGTTGCTTGTATATGAAATAAAGTGATTTATTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875095 endoxyloglucan transferase [Arabidopsis lyrata subsp. lyrata] | 977 | 2e-103 |
| NP_178294 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 949 | 3e-100 |
| AAM63050 putative xyloglucan-specific glucanase [Arabidopsis thaliana] | 949 | 3e-100 |
| AAD45125 endoxyloglucan transferase [Arabidopsis thaliana] | 949 | 3e-100 |
| NP_172925 xyloglucan:xyloglucosyl transferase [Arabidopsis thaliana] | 905 | 4e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LDS2 Probable xyloglucan endotransglucosylase/hydrolase protein 27 | 949 | 1e-101 |
| Q38909 Probable xyloglucan endotransglucosylase/hydrolase protein 28 | 905 | 2e-096 |
| Q38908 Probable xyloglucan endotransglucosylase/hydrolase protein 30 | 631 | 1e-064 |
| Q8L7H3 Probable xyloglucan endotransglucosylase/hydrolase protein 29 | 591 | 5e-060 |
| Q8LC45 Probable xyloglucan endotransglucosylase/hydrolase protein 33 | 465 | 2e-045 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A2TEJ2 Xyloglucan endotransglycosylase/hydrolase XTH-39 | 792 | 4e-082 |
| A9P987 Putative uncharacterized protein | 789 | 8e-082 |
| B9HJJ8 Predicted protein | 789 | 8e-082 |
| B9HVR7 Predicted protein | 779 | 1e-080 |
| B9SNH8 Xyloglucan endotransglucosylase/hydrolase protein 2, putative | 773 | 6e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G01850.1 EXGT-A3; hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 949 | 1e-102 |
| AT1G14720.1 XTR2 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE RELATED 2); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 905 | 2e-097 |
| AT1G32170.1 XTR4 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 631 | 1e-065 |
| AT4G18990.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 591 | 4e-061 |
| AT1G10550.1 XTH33; hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 465 | 2e-046 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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