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Information for unigene UN20990

FASTA Sequence
Unigene ID: UN20990Length: 1019 SSR 
TTTCCGATTTCTATCAGAGACTCTTCAAAGCCTCAATCTTCGCTCTCGCTCGCTCTCTGTTTCTCTCTCTACTTCGCCGTTTAGAT
CTGAGTTTTGGGGGAGATACAAGGCTCCCTAAGTTAACAACAAAGCACTCTTACTTTCACTTCTTCAGCTCTACCAAATCTCTCTC
TCTCCAGTCATGGCAGGATCCGCACCAGAAGGCACACAGTTTGATGCTCGTCAGTTCGACCAGAAGCTCAACGACGTTCTTGAGGG
ACAAGATGAGTTCTTCACCTCTTACGATGAGGTTCACGACAGCTTCGACGCCATGGGTCTCCAAGAGAATCTCCTTAGGGGTATCT
ACGCTTATGGTTTCGAGAAACCATCTGCAATCCAGCAGAGAGGAATCGTCCCTTTCTGCAAAGGCCTCGACGTGATCCAACAAGCC
CAGTCCGGTACCGGCAAAACCGCCACTTTCTGCTCCGGCGTCCTCCAGCAGCTCGACTTCAGCATCGTCCAGTGCCAGGCCCTCGT
CCTGGCCCCGACCAGAGAGCTCGCCCAGCAGATCGAGAAGGTCATGAGGGCCCTCGGCGACTACCTCGGCGTCAAGGTCCACGCCT
GCGTCGGTGGAACCAGCGTCCGCGAGGACCAGCGCATTCTCCAGGCCGGTGTCCACGTCGTCGTCGGAACTCCGGGTCGCGTGTTC
GACATGCTCAAGAGGCAGTCTCTCCGCGCCGACAACATCAAGATGTTTGTTCTTGATGAAGCTGATGAGATGCTCTCCCGTGGTTT
CAAAGACCAGATCTATGACATCTTCCAGCTTCTCCCACCCAAGATCCAAGTGGGTGTCTTCTCAGCAACAATGCCACCAGAAGCTC
TCGAGATCACGAGGAAGTTCATGAGCAAGCCAGTGAGAATCCTGGTGAAGCGTGACGAGCTCACCCTAGAAGGTATCAAGCAGTTC
TACGTCAACGTTGAGAAGGAAGACTGGGAGCTCGAGACGCTCTGCGACCTCTACGAGACTCTCGCCATCACTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884997 predicted protein [Arabidopsis lyrata subsp. lyrata]14091e-153
NP_566469 translational initiation factor 4A-1 [Arabidopsis thaliana]14053e-153
NP_001030693 translational initiation factor 4A-1 [Arabidopsis thaliana]14053e-153
AAM63951 Eukaryotic initiation factor 4A, putative [Arabidopsis thaliana]14053e-153
BAH56988 AT3G13920 [Arabidopsis thaliana]14053e-153

Swiss-Prot top hits (Blast detail)Scoree value
P41376 Eukaryotic initiation factor 4A-114051e-154
P41377 Eukaryotic initiation factor 4A-213711e-150
P41379 Eukaryotic initiation factor 4A-213281e-145
Q40465 Eukaryotic initiation factor 4A-1113172e-144
Q40467 Eukaryotic initiation factor 4A-1413163e-144

TrEMBL top hits (Blast detail)Scoree value
C0Z2Q9 AT3G13920 protein14052e-153
Q2V3W0 Putative uncharacterized protein At3g13920.214052e-153
Q6T8C6 Initiation factor eIF4A-1513164e-143
A9P851 Predicted protein13102e-142
A9PA36 Putative uncharacterized protein13075e-142

Arabidopsis top hits (Blast detail)Scoree value
AT3G13920.1 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor14051e-155
AT3G13920.2 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor14051e-155
AT1G54270.1 EIF4A-2; ATP-dependent helicase/ translation initiation factor13711e-151
AT3G13920.3 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor12903e-142
AT1G72730.1 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative12625e-139

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  8%
 
182  17%
 
216  50%
 
203  25%

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