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Information for unigene UN21022

FASTA Sequence
Unigene ID: UN21022Length: 661  SNP
GGTATAGTTTTGATTTTGATTCAAATAATGTTTACATTATATTAAGATTATTCAGATGATCCAACAACAATAATAACATAAATACT
AAGTTACAAGTCTTAGTCAAATTGAATTGTAGTTAGTCGATCTATTATAAAGTAGTATTTCTTGTTTTGAAATTATTTGTCCCAAT
CGTAAAGGTGATAACCATATTCGTTGCGATCATAAAACATCAGAGGCTTATCACCATATCCACCATCACCGTAGACTTGCCAAACA
CATTCACCACATTTGTCTCTCCCATCCCCACGACTGAATGCAGTAAACCAATGATCTCCACCTCCACGCCATGTAACATGGCAACG
GAATTTTGTAGTGGCTTTCCAATTTACCTTAAAATGGAAAGTAGTTGACTGATGATAAGAGATATGCTTTAACCCCAAATCACTTT
CTGAAGAGCTGCAATGTACATTCATAACTTCTTTGTTAACTGCATAATTTGTTATCACAACAGTTTTCTTTTGAAAAGGTAACAAA
CTTCTTGCGATTGGTCTGTCCATTGTAGCATCTGTGGAAACTGACAATGACGATATTGACAAATAAAGAACAAAAGCATAAAACAT
TACTTTTGTGCATTGGTTATTGTTGGCGAAAGCCATGATTCTGAACACGAAAGAATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001078292 self-incompatibility S1 family protein [Arabidopsis thaliana]2652e-021
ABK28370 unknown [Arabidopsis thaliana]2652e-021
NP_001118843 self-incompatibility S1 family protein [Arabidopsis thaliana]2634e-021
XP_002878028 hypothetical protein ARALYDRAFT_906944 [Arabidopsis lyrata subsp. lyrata]2625e-021
XP_002876323 hypothetical protein ARALYDRAFT_906999 [Arabidopsis lyrata subsp. lyrata]2501e-019

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
A0ME20 Putative uncharacterized protein (Fragment)2651e-021
Q1G395 Putative uncharacterized protein2651e-021
B3H6P2 Uncharacterized protein At3g55254.12632e-021
B3H7I0 Uncharacterized protein At3g54925.12193e-016
B3H595 Uncharacterized protein At3g55672.12086e-015

Arabidopsis top hits (Blast detail)Scoree value
AT3G55252.1 LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55254.1); Has 81 Blast hits to 78 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2651e-023
AT3G55254.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55252.1); Has 76 Blast hits to 73 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2632e-023
AT3G54925.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55254.1); Has 68 Blast hits to 65 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2192e-018
AT3G55672.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55665.1); Has 80 Blast hits to 77 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2084e-017
AT3G55677.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility S1 (InterPro:IPR010264); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55672.1); Has 75 Blast hits to 72 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1977e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  25%
 
112  13%
 
126  38%
 
91  6%
 
103  19%

Unigene MembersMember information