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Information for unigene UN21039

FASTA Sequence
Unigene ID: UN21039Length: 1025 SSRSNP
GGCCCCATTGTCTTCCTCGTCACAAAACTCACTTTGTGCACAGAGAGACAGAGAGAGAGAGATCAAAGAAAGAAAGAAAACCGTAA
TTTTAAGGCAGAAGAACGATGTCGAGCTTACAGAAGAAGCCGAGCTTCTCAGAAACATGTAGTCGTTTGAGTCGTTACCTCAAGGA
GAAAGGTAGCTTCGGAGATCTGAGCTTGGGGATGACATGCAACCCCGACATCAATGGAGTTTCTGCTGTGTCACGTCAGCCAACGA
TGATGAATCTCTTCCCTTGTGAAGAAGGTTCGTCTCCTCCTGAAGACGTTAAACCAAAGCATATGGTTCCTCCTCGCCAGTCAAGC
TTTTCTTGCTCCTCTTCCTCTGAAGTTAAGGAGGAAGTGGAGAAGACCGTGGAGTCTCAATCGTCTCCGTTGACCATATTCTACGG
TGGTCAAGTTATGGTGTTTGATGATTTCCCTGCTGAGAAAGCCAAACAAGTCACTGACTTGGCTAACAAAGGAAGTGCTTATACTC
AAAACTTAGCCAAGAACCAAAAGGAGATTGCAGCAGCACCAGAGCCAATCCAGACCAACACGTCTTCTCTAGCTTGCGAACTGCCA
ATTGCTAGGAGAGCTTCGCTTCATCGGTTCCTGGAGAAGAGAAAGGATAGGATTACATCAAAGGCACCGTACCAGGTAGACGGTTC
AACCGAAGCATCTTCCAAGCCTAACACATCTTGGCTCGGTTCTCAGTAATCTTGACACCATCTCTAAAGACTCTATCGATGCTCTG
TCGTTTACAAATTATCAAGCTCCTCCCTTGTTGATTGTTTATATAAAAAAATATTTTTCACGTTTGTTCAAATGCAACATCAGCAA
TATCTTTTGTATGAATGTGGTCTTATAGTGGGTTCAAACCTATCTGCCGGTGTCACACATTTGCTTGCAACTTTTGTAAGAAACAT
CAGTTCTGTTGTTGTTGGTTTCTTTGTTGACGGCTTTAGTATCATCTTAGTTTAATTAATTCAAAGTGTTCTTTCTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889001 hypothetical protein ARALYDRAFT_476633 [Arabidopsis lyrata subsp. lyrata]7323e-075
BAJ33919 unnamed protein product [Thellungiella halophila]5452e-053
NP_565096 protein TIFY 10B [Arabidopsis thaliana]4861e-046
AAM64554 unknown [Arabidopsis thaliana]4851e-046
NP_564075 protein TIFY 10A [Arabidopsis thaliana]2906e-024

Swiss-Prot top hits (Blast detail)Scoree value
Q9LMA8 Protein TIFY 10A5725e-058
Q9S7M2 Protein TIFY 10B4865e-048
Q9C9E3 Protein TIFY 11B1926e-014
Q9M246 Protein TIFY 3A1488e-009
Q93ZM9 Protein TIFY 91406e-008

TrEMBL top hits (Blast detail)Scoree value
Q3ED96 Uncharacterized protein At1g19180.23901e-035
B9ST81 Putative uncharacterized protein3792e-034
C5XDP2 Putative uncharacterized protein Sb02g0257203003e-025
C6T4J6 Putative uncharacterized protein2734e-022
C0PFI1 Putative uncharacterized protein2261e-016

Arabidopsis top hits (Blast detail)Scoree value
AT1G19180.1 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding5725e-059
AT1G74950.1 TIFY10B4864e-049
AT1G19180.2 JAZ1 (JASMONATE-ZIM-DOMAIN PROTEIN 1); protein binding3906e-038
AT1G72450.1 JAZ6 (JASMONATE-ZIM-DOMAIN PROTEIN 6)1925e-015
AT5G13220.1 JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)1406e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  20%
 
122  20%
 
201  10%
 
113  30%
 
212  20%

Unigene MembersMember information