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Information for unigene UN21041

FASTA Sequence
Unigene ID: UN21041Length: 1416 SSR 
GGAGATTCAGAGGACTTGAATATGCAAAAAGGAAATTCAAATCCCACACAACAATCTCAGTTATCATAACTTACATGTTTCCCATT
TTAAAAACCACACACAACACAATGATACAACAGAGATAGAAAACCCATCAAACTTCGTGACTGGTTTGAGCAGATGTGGGAGGAGG
AACCTGTTTACCACGTCCCATTGTGAACCCTCTCGTCCCATCAGGCATTCTTGGGCCAGGCGGAGGCTTTGAGACCTCAACGTGAT
GATGATGATGATTATAATTATGATGAAGAGACGATGAGGTTGATGGTGAGCTTCCATGTCCGTTGTTGCCTTGATGATTCTGTCTC
TTTCCCCGTCCCCGACTTCTTGTTTTGTTCCCACTTTTATCCCCACTATCATTATCAGCCGGAGTATCAGAACGATGGTGACGGTG
ATGCTCATGTTCATTTGACTTTTTGTTCTCCTCACCTCCAATTTGATCGGGCACTTGGCCTGTATTGTCCTTCACTGTATCAACTT
CCTTCCTACCCGGTCTTCTCTGTGCAAACTTTCCTTTTTGTTCCAGAATCTTAACTCGCAGCCCATTTCTCCAGTCTTGCTCATTA
TTTAGTGTAGCTGCCGCTTTCTCAGCAGCCTCCACTGTTTCGTATTCCACAAAGGCATGTAACCTGGTTCTGATAAACGTGTCCTT
CTTACAACCTTTCTCTGATTTTTCAGCAGCATTTGGATCGCATATGGATACACTTTTGATACTTCCAGCTTTACCAAATATGGCAC
GAATGTTATCTTCTGAATGATCCTCTGGCAAATTTTCTACCAACACAGTGAAAATCTTTGGATCCCTGACCTCAGGAAGAGGACTC
AGACGCTTCACCTTCTTCTCATCCGAACTAACAACAAGAAATGAGGACTCCTTTAACGCGGATACTATCAAAGCATGGTCTCGAGT
AAGCTTCTTCATTTTATGGAATGTAGCAATGGTCGATATGGGAACAAAGCCTTTCTTGTTCTTCTTCATAGCATTGAGAAGAAACT
TGTCAGTAGGCAGATTCTCGTCACTAAAGTAGTATTCAACCTGTCTAATGATCTTCTTCTTCAACTCATCCTTGTCGGCCTCGACC
GGAAGATGATCAAAATCATCATCTGACGGGGTCAGATCCGAGACAACAACTACTTCATCGGAAGATCCGGCAGCTGGTAACGAATC
GACTTCACCTGACGGCGGATGCGGTTGGGAAATATCCGCGATTGAGCCAATCGCGTCTTCCGCTGCTTCCGATTTGACGACGGCGG
CGGCGGCGACGACGGAAGGAGTTTCTACCGTTTCCATGTTCCCGGAGCGAAGAGGAAGAGATCGCCGGAGATGGGAGATGAATGAG
TCCCCGCCTCCCTTTGTCCTTTGAGTCTCTCTTCCTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002865201 predicted protein [Arabidopsis lyrata subsp. lyrata]13714e-149
BAB11080 unnamed protein product [Arabidopsis thaliana]13608e-148
NP_851141 RNA-binding protein [Arabidopsis thaliana]13608e-148
NP_568660 RNA-binding protein [Arabidopsis thaliana]10713e-114
NP_001078721 RNA-binding protein [Arabidopsis thaliana]10632e-113

Swiss-Prot top hits (Blast detail)Scoree value
Q05CL8 La-related protein 72232e-017
Q5XI01 La-related protein 72205e-017
Q28G87 La-related protein 72152e-016
Q4G0J3 La-related protein 72125e-016
Q4R627 La-related protein 72125e-016

TrEMBL top hits (Blast detail)Scoree value
Q94A38 AT5g46250/MPL12_313606e-148
Q9FL36 Similarity to RNA-binding protein13606e-148
Q3E8F9 Putative uncharacterized protein At5g46250.210712e-114
A8MS45 Uncharacterized protein At5g46250.310632e-113
C6TAG6 Putative uncharacterized protein7701e-079

Arabidopsis top hits (Blast detail)Scoree value
AT5G46250.1 RNA recognition motif (RRM)-containing protein13612e-150
AT5G46250.2 RNA recognition motif (RRM)-containing protein10711e-116
AT5G46250.3 RNA recognition motif (RRM)-containing protein10638e-116
AT3G19090.1 RNA-binding protein, putative4723e-047
AT2G43970.1 La domain-containing protein4518e-045

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  40%
 
93  60%

Unigene MembersMember information