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Information for unigene UN21042

FASTA Sequence
Unigene ID: UN21042Length: 1006  SNP
GGTGAACACACACACTTTCCAGCAATATAACGCAATAATACAGTTTTATATACAGTTCAACATCACCATCGCATCTCTTCCAATAA
TTTCATTTAGATACAACAAATGAAAAATAAGACAACCAAAGCAATTGCAAAATGAACAAACAAATTTCAAAACTACCACAAATTAA
AGCTTAATCAATTTCAAGATTAAACTAGCATGAGCTCATAAGAAGTTGCTCTAAATACTCAGCACCTAAATCTTCAAAAACCACAA
GTGTACCACCTTCTTGCTTCACAACACTCTGCTCATTACTTCTTGATGTTGAAGATGAAGACCAAGAAGTTGAGGATGAAGATGAA
TGAGAAGAAGAATTAGAAGAACAAGATGAAGAGTTAGTAGATCTCTTTTTCCCTCTAGGCCGGTTTCGAAGAGAGTGTTTTCTCTT
CAAGGCCATAATCGGAGATCCACCATCTTGAAGATTCACATTCTCCATTTTCTTGAGAGACTCTCTGACCACTTCCACGGGGAAAT
TGAGTACTGCGAGAGATCCTTTTGTTGCGAAAGCGGCTTGGTCATAAGCAAGAGCGGCTTCCTCAGCTTCATCAAACGTCCCGAGC
CAAACCCTAACTCCGTTCCTAGTCGAATCTCTTATCTCAGCAGCAAATTTTCCCCATGGCCTCTTCCTCACTCCTCTGTATGACTT
CTCTTCATCAATAACACCACCAATCTTTTCTTCCTCCTCGGAGTTGGAAACGTCGCCGTTTTGAGCTTCTTCTTTAATCGTCGGCT
CCGGTGACTCAAATGAGAAGAAGCCATCAGAGTAATTATAATTAGGGCAAAAGAAGGATTGATGATCAGATGATTGATCTAAAAGA
GAACTCTCGTTCCATAAAAACGATTCTTGTGATGAGCTCCAAGAACTCGGAGAAGAAGACATGGTAGATTGAGAATACTGTTTTTT
TTTTCCTTTTAACAGCTTTTTCTCTTTCTTTTTGGTTCTCTCTTTTTGTTGTGGCCCCCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850162 ethylene-responsive transcription factor 15 [Arabidopsis thaliana]10343e-110
XP_002881165 hypothetical protein ARALYDRAFT_482050 [Arabidopsis lyrata subsp. lyrata]10282e-109
AAD20668 ethylene reponse factor-like AP2 domain transcription factor [Arabidopsis thaliana]10083e-107
NP_172106 ethylene-responsive transcription factor ERF094 [Arabidopsis thaliana]7119e-073
XP_002889588 hypothetical protein ARALYDRAFT_470633 [Arabidopsis lyrata subsp. lyrata]5953e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q8VYM0 Ethylene-responsive transcription factor 1510511e-113
Q9LND1 Ethylene-responsive transcription factor ERF0947114e-074
Q8LDC8 Ethylene-responsive transcription factor 1B3745e-035
Q40478 Ethylene-responsive transcription factor 52742e-023
O04681 Pathogenesis-related genes transcriptional activator PTI52625e-022

TrEMBL top hits (Blast detail)Scoree value
C6ZLB2 Ethylene-responsive factor (Fragment)5736e-057
B9H8L1 AP2/ERF domain-containing transcription factor4186e-039
B3IX26 Transcription factor AP2-EREBP4151e-038
B9GS20 AP2/ERF domain-containing transcription factor4132e-038
B9T293 Ethylene-responsive transcription factor 1B, putative (Fragment)4071e-037

Arabidopsis top hits (Blast detail)Scoree value
AT2G31230.1 ATERF15 (Ethylene-responsive element binding factor 15); DNA binding / transcription activator/ transcription factor10521e-114
AT1G06160.1 ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59); DNA binding / transcription activator/ transcription factor7114e-075
AT3G23240.1 ERF1 (ETHYLENE RESPONSE FACTOR 1); DNA binding / transcription activator/ transcription factor3744e-036
AT5G47220.1 ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2); DNA binding / transcription activator/ transcription factor2543e-022
AT4G17500.1 ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1); DNA binding / transcription activator/ transcription factor2534e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  27%
 
115  45%
 
122  18%
 
91  9%

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