Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21063

FASTA Sequence
Unigene ID: UN21063Length: 1271 SSR 
GACATCATCTCATTCTTCTTCTTCTTCCTCTTCTCGCTTTTAGCTATTATGGCTTTCTCTACACCATCACTTGCCAAACTCTCTCT
TTTGGTCGCCATTTCGGCATCAGCACTCCTCTGCTCAGCTCTTGCCCGTGATTTCTCCATCATTGGATACACACCTGAGCATCTGT
CATCCACCGATAACCTTCTAGAGCTCTTCGAGTCATGGATGTCAGAACACAGCAAGGCTTACCAAAGCGTTGAGGAGAAGGTGCAC
AGGTTCGAGGTGTTCAGGGATAACCTGATGCATATAGACCAGAGGAACAACGAGATCAGCAGTTACTGGCTCGGGTTAAACGAGTT
TGCGGATCTGACCCATGAAGAGTTCAAGAGGAAGTATCTCGGATTTGCAAAGCCTCCGCAGTTCTCTAGAAAGAGGCAGCCCTCCT
CTGCTAACTTCAGGTACAGAGACGTCACAGACTTGCCTAAATCCGTTGACTGGAGGAAGAAAGGCGCTGTGACTCCTGTCAAGAAC
CAGGGTTCATGTGGTAGTTGTTGGGCGTTTTCGACAGTTGCGGCTGTTGAAGGGATCCACCAGATCGCAACAGGGAACCTGAGTTC
GCTTTCGGAGCAAGAACTCATAGACTGTGACACAACTTACAACAACGGTTGCAATGGAGGTCTAATGGACTATGCATTCCAGTACA
TCATATCGACAGGTGGACTCCACAAAGAAGACGATTACCCCTATTTCATGGAGGAAGGCATTTGCCAAGAGCAGAAGGAGGATGTA
GAAGTTGTGACAATCAGCGGCTATGAAGATGTCCCAGCAAACAGTGATGTAAGCCTGAAGGCTTTAGCTCATCAGCCAGTAAGTGT
GGCTATCGAGGCTTCAGGAAGAGACTTCCAGTTTTACAAAGGGGGAGTGTTCAATGGGAAGTGTGGAACAGAGTTAGACCATGGTG
TAGCTGCAGTTGGGTATGGTTCATCAAAGGGATCTGACTATGTGATTGTGAAGAACTCATGGGGACCAAGATGGGGAGAGAAAGGG
TTTATTAGGATGAAGAGAAACACTGGTAAACCAGAGGGAATTTGCGGAATCAACAAGATGGCTTCATATCCTACCAAGACCAACTA
AGACAGACTCACATCTATCTTCTCATTTTGCTACTGCTTCCTACGTTTTTCTTTTCTTTCCAATGCATTTTTTATTTTACCTGTTT
TCAAGCATATTATATTGTATTTGATGAATTTGAGATTTTAAAATAATATTCTTTTCACTGGGAGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567983 Xylem cysteine proteinase 1 [Arabidopsis thaliana]17074e-188
XP_002869093 hypothetical protein ARALYDRAFT_491113 [Arabidopsis lyrata subsp. lyrata]16895e-186
XP_002279940 PREDICTED: hypothetical protein [Vitis vinifera]14378e-157
XP_002328138 predicted protein [Populus trichocarpa]14314e-156
XP_002306996 predicted protein [Populus trichocarpa]13553e-147

Swiss-Prot top hits (Blast detail)Scoree value
O65493 Xylem cysteine proteinase 117072e-189
Q9LM66 Xylem cysteine proteinase 213415e-147
P14080 Chymopapain9742e-104
P25776 Oryzain alpha chain9624e-103
P43297 Cysteine proteinase RD21a9544e-102

TrEMBL top hits (Blast detail)Scoree value
B9MZ15 Predicted protein14313e-156
B9H5V8 Predicted protein13552e-147
Q0WT15 Putative cysteine proteinase13363e-145
B9GPP4 Predicted protein13282e-144
Q3E9R1 Putative uncharacterized protein At4g35350.213255e-144

Arabidopsis top hits (Blast detail)Scoree value
AT4G35350.1 XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type endopeptidase/ cysteine-type peptidase17081e-190
AT1G20850.1 XCP2 (xylem cysteine peptidase 2); cysteine-type peptidase/ peptidase13423e-148
AT4G35350.2 XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type endopeptidase/ cysteine-type peptidase13253e-146
AT5G43060.1 cysteine proteinase, putative / thiol protease, putative9769e-106
AT1G47128.1 RD21 (responsive to dehydration 21); cysteine-type endopeptidase/ cysteine-type peptidase9543e-103

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  33%
 
62  67%

Unigene MembersMember information