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Information for unigene UN21079
| FASTA Sequence |
| Unigene ID: UN21079 | Length: 1010 |
| SNP | GGATATCAACTCTGCTCATTCTCTCGGCGTGGAGGCTGCTTTCATCAACCAGAACTTCGCTCAGCAGGTTTTGGTTAAGAATGGAA
AGAGGGAGACTTTTGATGAGCCTATCCCTAATGCTAACGAAGGGTGAAGAGAATGCTTCTATTGCTTATAGGTATAGGAGGTGGAA
GCTTGATGATAGTATGTATCTAGTCGCTAGGTGTGAGTTGCAGAGCACTGTTGAACTGAATAACCAGAAATCGTTCCTCACTTTGA
ACGCTCTTAACGAGTTTGATCCTAAGTACTCTGGTGTTGATTGGAGACAGAAGCTAGAGACTCAGAGAGGTGCGGTTTTAGCTAAT
GAGTTGAAGAATAATGGTAATAAGTTAGCTAAGTGGACCGCACAGGCTCTGTTGGCTAATGCGGATATGATGAAGATTGGTTTTGT
TTCTAGGGTTCATCCTCGTGATCATTTCAACCATGTTATTCTATCGGTTCTGGGGTATAAGCCGAAGGATTTTGCTGGGCAGATTA
ATCTGAACACTTCCAACATGTGGGGAATTGTCAAGTCCATTGTTGATCTGTGTATGAAGCTGAGTGAAGGAAAGTATGTTCTAGTG
AAGGATCCGTCCAAGCCTCAAGTTAGGATTTACGAGGTTCCAGCTGATGCTTTTGAGAATGATTATGTGGAAGAGCCTCTACCTGA
GGATGAACAGGTTCAGCCACCTGAGGAGAACAACACTGAAGGAGGAGGAGCAGAGACTAATGAAACTGCAGAGGATAAGAAACCCG
AAGGTCAGGCCTGATTATGGTAAATGTCAAAGACTTGTTTTGAGTTTTTACCTTTCTTTAATGTTCCAAAGTTGTGCTCTTTTTGA
AGAGCTGAACGGTTCATTTTACTGGTTTATGCTTTTATCTTGTAGAAGATTTTTGAACCTTATGAGTCTTCTTGTTTGAATAAACT
ATTGAGAGCTTTTGCAATTTATGGCTAAAACATTCAGTGTTTACTCCACTTGATTTTGAAAGTG
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_199245 translation initiation factor eIF-3 subunit 7 [Arabidopsis thaliana] | 1057 | 7e-113 |
| XP_002863589 hypothetical protein ARALYDRAFT_917176 [Arabidopsis lyrata subsp. lyrata] | 1047 | 1e-111 |
| NP_193830 translation initiation factor eIF-3 subunit 7 [Arabidopsis thaliana] | 1010 | 2e-107 |
| AAG53638 initiation factor 3d [Arabidopsis thaliana] | 1010 | 2e-107 |
| AAL38704 putative translation initiation factor eIF3 [Arabidopsis thaliana] | 1010 | 2e-107 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P56820 Eukaryotic translation initiation factor 3 subunit D | 1010 | 8e-109 |
| Q16UF8 Eukaryotic translation initiation factor 3 subunit D | 549 | 2e-055 |
| Q7QBW3 Eukaryotic translation initiation factor 3 subunit D | 548 | 3e-055 |
| B0X6P7 Eukaryotic translation initiation factor 3 subunit D | 543 | 1e-054 |
| Q0ZB77 Eukaryotic translation initiation factor 3 subunit D | 542 | 2e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FKV6 Eukaryotic translation initiation factor 3 subunit 7 | 1057 | 5e-113 |
| Q8VZ60 Putative translation initiation factor eIF3 | 1010 | 1e-107 |
| Q9C5Y8 Initiation factor 3d (Fragment) | 1010 | 1e-107 |
| B9N3G6 Predicted protein | 972 | 3e-103 |
| B9RBD0 Eukaryotic translation initiation factor 3 subunit, putative | 954 | 4e-101 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G44320.1 eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative | 1058 | 2e-115 |
| AT4G20980.1 eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative | 1011 | 6e-110 |
| AT4G20980.2 eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative | 1011 | 6e-110 |
| AT4G20980.3 eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putative | 1011 | 6e-110 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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