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Information for unigene UN21081
| FASTA Sequence |
| Unigene ID: UN21081 | Length: 1530 |
SSR | SNP | CAAACCTCATACCATTTACAAGTCTCCAACAAAATGTTTAATGTTTAGAGATCATGAAGTCTTTGAAAGAGTGGAAGATTCAAAGG
TAAATGTCACCGTAAACAAGACCGACATAAACAGTTTTTTTTTTTTTAATTACCAAAGAAAGACAAAACATTACTGACCAAAGAAA
GACAAAACCGTTCTTAGCTCTCCAAAAAGACAAACCTTTTGGTCAAAAGACATAACTAAACGGTCCTGGCTGAGTGAAAAAATCCC
AACTTTTTCATTTCTTTTTCAGTCTTCAAGCTGTTTAGGGGCACTGCGTCTCCAGACTCCAGCCAAGACGCTACCGATGATGGAGT
GACAGACGCTAGAAACAGCGCACGGTACTGCAGTCAGCGGGTTCCCAAAATGCTCTGCCGCCAGTACTAGTCCAAGCACCGAGTTC
TGCATGCCAACTTCGATAGAGACAGTTCTTGACGAAGCAACATCAATTCTGAGCAATCTCGAAAACAGATAGCCAAAGAGGAATCC
AGAGAGGTGAAGAAGGACACAAGCCATGACCACTTGTTTCCCGGACGTGAGTATCGCAGACGCGTTCTGACCGATGGCAGTCCCGC
AGAGAATCGCGACCGTTCCAACCGCAACCGGAGCCATGAGAGGAGAGACAAACTTCACCACTCTTTGAAAGTACTGATTCATAAAT
GCACCAGCCAACACTGGGAGAAGAACCACCTGTAGTGTTGACTTTACTAATCCAAGAGCATCAACTGCGACGTATTGTTTGGCGAG
CTTGGCTGTAAGAAGCGGTGTCATGATCACAGCTGAAAGAGTACTAGCTGCTGTCATCAACACTGATAGTGCAACATTCCCACGTG
CAATGTAGGTGACTATATTACTTGCCGTACCGCCTGGACAGCAACCAACCAATATGAGACCGGCAGCATAATGTGATGGCAAATTC
AAGAGCTTACTCACTAGAAATGCTGATAATGGCATGACCGAGTACTGCAAGAGAAAGCCAGCGAAGAGCTCTTTGGGCATCTTCAA
CGCGCCGCGGAGATCATCGAGAGTCAACGTCATCCCCATCCCGAGCATGGTGATGGTGAGACCTATAATGGTCAAATCGGGAGTGA
CCCAATTGAAAGCCCCCGGCTTCACCAGCCCCAGCAAACACCCCAGCGAAACCCACACCGGAAACGCCGTCGACACCGCCTCTCCC
AGATACTCCACCCACTCCCCAAAGCTCCTCCTCCTCCTCTCTTTCTCAGCAGGGAAGTCGCTCGAAGAAACTCCGCACCGAGTAAA
AAGCTCGACGCTTCGTCGCCGCCTATGCAGAATAGGAAGAGGAGCCACCACTCGGCGACGCGATTCGAGAGATATCTCGCGACTCG
TCGAACAAGAGATTCGCCGGAGATGTACTGGAGTGAGGTTAAACTTGCGAAAAGAGTTCGCTTTCAATTGCGGCGTCGTTGTTCCG
TTTGAGAGGGAGAGAGAAACCACGGAGGAGGCCATTTTTCTTCGCCGGCGATTTTCTAATCGGAGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_565182 Sodium bile acid symporter-like protein [Arabidopsis thaliana] | 1573 | 2e-172 |
| XP_002889199 bile acid:sodium symporter family protein [Arabidopsis lyrata subsp. lyrata] | 1532 | 1e-167 |
| XP_002531245 sodium-bile acid cotransporter, putative [Ricinus communis] | 1336 | 5e-145 |
| XP_002283695 PREDICTED: hypothetical protein [Vitis vinifera] | 1258 | 6e-136 |
| CBI20101 unnamed protein product [Vitis vinifera] | 1186 | 1e-127 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O34524 Uncharacterized sodium-dependent transporter yocS | 595 | 2e-060 |
| O08705 Sodium/bile acid cotransporter | 286 | 1e-024 |
| Q12908 Ileal sodium/bile acid cotransporter | 284 | 2e-024 |
| Q96EP9 Sodium/bile acid cotransporter 4 | 282 | 4e-024 |
| Q3UEZ8 Sodium/bile acid cotransporter 4 | 282 | 4e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93YR2 Putative uncharacterized protein | 1573 | 1e-172 |
| B9SZ26 Sodium-bile acid cotransporter, putative | 1336 | 4e-145 |
| Q01LJ7 OSIGBa0092E09.1 protein | 1103 | 4e-118 |
| Q7XVB3 OSJNBa0072D21.3 protein | 1103 | 4e-118 |
| C5WVA9 Putative uncharacterized protein Sb01g016820 | 1092 | 7e-117 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G78560.1 bile acid:sodium symporter family protein | 1578 | 2e-175 |
| AT2G26900.1 bile acid:sodium symporter family protein | 713 | 3e-075 |
| AT4G12030.2 bile acid:sodium symporter family protein | 462 | 4e-046 |
| AT3G25410.1 bile acid:sodium symporter family protein | 460 | 8e-046 |
| AT4G22840.1 bile acid:sodium symporter family protein | 424 | 1e-041 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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