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Information for unigene UN21086
| FASTA Sequence |
| Unigene ID: UN21086 | Length: 1168 |
SSR | | GGGTGTCGAGAAGAAGAAGAAGAAGAAGAATAGTCGGATCTGAGCAAGCTAGGGTTTCGTCTATCATCAATCAATCAATCTCGGAT
CAAAATGGCAATGGCTGTTTTCCGACGCGAAGGGAGGCGTCTCCTCCCTTCAATCGCAGCTCGTCCAATCGCTGCCACCACACCGT
CTCCTCTCTCTTCTGACCGGGAGGAGGGACCTTTTGGAGTTCGATCTATCTCTACTCAAGTGGTGCGTAACCGTATGAAGAGTGTA
AAGAACATCCAGAAGATCACAAAGGCCATGAAGATGGTTGCTGCTTCTAAGCTTAGAGCTGTTCAAGGCAGAGCTGAGAACTCCCG
TGGTCTTTGGCAGCCATTTACTGCTCTTCTTGGAGATAATCCCAGTATTGACGTAAAGAAGAGTGTGGTGGTCACTCTCTCTTCTG
ACAAGGGTCTCTGTGGTGGAATTAACTCCACTGTTGTTAAAGTCAGCAGGGCTCTCTACAAGTTGAACGCTGGTCCTGAAAAGGAC
GTGAAGTTTGTTATCGTGGGAGAGAAAGCGAAAGCTATAATGTTTCGTGACTCGAAGAACGACATCTCCCTTACTGTCACAGAGCT
GAACAAGAATCCACTCAATTATGCTCAGGTCTCAGTTCTTGCTGATGACATCCTGAAGAACGTTGAATTTGATGCTTTGCGCATTG
TCTACAACAAGTTCCATTCCTTTGTCGCATTTCTACCAACTGTGGCCACTGTTTTGTCTCCTGAGATTATCGAAAAGGAATCTGAA
GTCGGAGGAAAACTCGGTGAGCTGGACTCATACGAGATTGAAGGTGGTGAAACCAAGGGAGAAATTCTGCAATGGACAGCTCACCC
TCACTTACAACAGGACTCGTCAAGCTTCTATCACAACAGAGCTTATCGAGATTATCTCTGGAGCTTCTGCACTTGAAGCTGCTAAA
TAAGCAAAGCACAGCATCCTTGTTTTGCCTTAAACTTGGCTTTTGATATATCTATCTATCATAAAGGGGAAGAGTGTGTTTTGAAC
TCTTTAAGGGCGGGGCTACTGAAATCAAATTTCTTTTGCTGGCTTCTTGTTGAGGCCACCAGACTTTACTATGATGTTTCTTATAA
TAAATTTCCCTGTAATTTCCAGCAGATAACGAATATTAACGTTTTGCAAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_180863 ATP synthase subunit gamma [Arabidopsis thaliana] | 1160 | 1e-124 |
| AAM96955 mitochondrial F1-ATPase, gamma subunit (ATP3_ARATH) [Arabidopsis thaliana] | 1157 | 2e-124 |
| XP_002881258 gamma subunit of mitochondrial F1-ATPase [Arabidopsis lyrata subsp. lyrata] | 1157 | 2e-124 |
| BAE98585 mitochondrial F1-ATPase, gamma subunit [Arabidopsis thaliana] | 1156 | 3e-124 |
| XP_002284053 PREDICTED: hypothetical protein [Vitis vinifera] | 970 | 1e-102 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96250 ATP synthase subunit gamma, mitochondrial | 1160 | 4e-126 |
| P26360 ATP synthase subunit gamma, mitochondrial | 934 | 7e-100 |
| B6IPC7 ATP synthase gamma chain | 169 | 3e-011 |
| Q2N8Z4 ATP synthase gamma chain | 162 | 2e-010 |
| B8IN02 ATP synthase gamma chain | 128 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q7GB12 ATP synthase gamma chain | 1160 | 7e-125 |
| Q8L7F2 ATP synthase gamma chain | 1157 | 1e-124 |
| Q0WWB3 ATP synthase gamma chain | 1156 | 2e-124 |
| B9SZS3 ATP synthase gamma chain | 968 | 1e-102 |
| C6T8L7 ATP synthase gamma chain | 937 | 5e-099 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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