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Information for unigene UN21089

FASTA Sequence
Unigene ID: UN21089Length: 1904 SSR 
GGATATCAACTAATCTCCTGCTCAAGAACCTCAAGAACCTCTCTCTGTAAACTTAACAAGATGGAGGCTACACAGAAACATATCAT
TCAAGATGGATCTTCAATGTTTTATCATCAACCATCTTCAGTAGTCAAGCAAATGGACATCTCTGTTCAGACCTTTGATTCTTACT
GTACACTTGAATCCTCTTCAGGCACCAAGTCTCATCATCCTTGTCCTAACAACAACAACAACATCACTTCTTCAACCACAAGCTTT
TCCTCTAACGGAAGTCCCGTCTCACAATCCAACAACACCAACAACAACACATCTCAGTTTTCCCCTGAAGACAACAACAACAACTC
TCCTCTAAGCGGATCTTCAGCTACAAACAACAACGAGACAGAGCTCAGTCTCATGCTCAAAGACCTGGAGACTGCAATGATGGAGC
CTGATCTAGAAGACACCAGCTTCAACGGTTATGAGTTTGGACAACAACAACAGCAGCAACAACATAGAGCTGCTGCTTCTTCAGCT
ATGTACAGATCCATGGAGATGATCTCCAGAGGAGACTTAAAAGGAACGCTCTACGAATGCGCTAAAGCAGTTGAGAACTGCGACGT
GGCGATGACTGATTGGTTGATCTCTCAGCTACAGCATATGGTCTCTGTCTCTGGAGAGCCTGTTCAGCGCTTAGGAGCTTATATGC
TTGAAGGCCTCGTCGCTCGGCTGGCTTCTTCAGGCAGCTCGATCTACAAAGCTCTTAGATGCAAAGACCCCACAGGTCCTGAGCTT
CTTACCTACATGCACATCTTGTACGAGGCTTGTCCTTACTTCAAGTTCGGTTACGAATCTGCCAACGGAGCTATAGCTGAAGCTGT
GAAGAACGAGAGCTTTGTGCACATTATAGATTTTCAGATCTCTCAAGGCGGTCAGTGGGTGAGTTTGATCCGTGCTCTGGGGGCTC
GTCCTGGTGGACCTCCGAGAGTGAGGATCACTGGGATTGATGATCCTAGATCATCGTTTGCAAGACAAGGAGGGCTTGAGTTAGTT
GGACAGAGACTCGGGAAGCTTGCTGAGATGTGCGGTGTGCCGTTTGAGTTTCACGGAGCTGCCTTGTGCTGCACGGAAGTGGAAAT
AGAGAAGCTTGGAGTTAGAAACGGAGAAGCCTTGGCGGTTAACTTCCCTCTTGTCCTTCACCACATGCCTGACGAGAGTGTGACCG
TGGAGAATCACAGAGACAGGTTGCTGAGGCTTGTCAAGCGTTTGTCTCCCAACGTTGTGACTCTGGTTGAGCAAGAAGCGAACACA
AACACCGCGCCGTTTCTTCCTCGGTTTGTGGAGACGATGAACCATTACTTGGCGGTTTTTGAGTCCATAGATGTGAAGCTCGCTAG
GGATCACAAGGAGAGGATCAATGTGGAGCAGCACTGTCTGGCTAGGGAGGTGGTGAATCTTATAGCTTGCGAAGGGGTTGAAAGAG
AAGAGAGGCATGAGCCTTTGGGGAAATGGAGGTCGAGGTTTCACATGGCGGGTTTCAAGCCCTATCCGTTGAGCTCTTATGTGAAT
GCGACGATCAAAGGGTTGCTTGAGAGTTATTCAGAGAAGTATACACTTGAGGAGAGGGATGGAGCGTTGTATTTAGGGTGGAAGAA
TCAGCCTCTCATCACTTCTTGTGCTTGGAGGTAACTTATGCCTTTTGATATGGAGAGAGAGTTTAGATGATGTTTTACAGTTTGTT
GATTCTGTTTTGTAAAAGTAAACAACTTATGAACCGAAGAAATGTTGTAATAGTAATAGTAGTAAGGTTGGTTGTTGGTGTTTAAA
GTTTTTAATTTTCATAAGAAAACTATGATTTGGCATTGAAACCTTGTGACAACTCTGTTGTTCTGTTTTAATGTGTTAGATTGATG
AGATTTTCTGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33810 unnamed protein product [Thellungiella halophila]24991e-279
AAK59436 putative scarecrow protein [Arabidopsis thaliana]24693e-276
NP_175475 scarecrow-like protein 5 [Arabidopsis thaliana]24693e-276
AAF87875 Putative transcription factor [Arabidopsis thaliana]24272e-271
AAK62666 F17J6.12/F17J6.12 [Arabidopsis thaliana]24237e-271

Swiss-Prot top hits (Blast detail)Scoree value
Q8H125 Scarecrow-like protein 524691e-277
Q9LDL7 Scarecrow-like transcription factor PAT114205e-156
Q8GVE1 Chitin-inducible gibberellin-responsive protein 214081e-154
Q9S7H5 Scarecrow-like protein 2112817e-140
Q69VG1 Chitin-inducible gibberellin-responsive protein 111867e-129

TrEMBL top hits (Blast detail)Scoree value
B9SST2 Chitin-inducible gibberellin-responsive protein, putative15938e-175
B9IAQ7 GRAS family transcription factor15562e-170
B9GJX2 GRAS family transcription factor15345e-168
A5ATM5 Putative uncharacterized protein15042e-164
Q1WBS8 Putative chitin-inducible gibberellin-responsive protein14136e-154

Arabidopsis top hits (Blast detail)Scoree value
AT1G50600.1 SCL5; transcription factor24708e-279
AT5G48150.1 PAT1 (phytochrome a signal transduction 1); signal transducer/ transcription factor14214e-157
AT5G48150.2 PAT1 (phytochrome a signal transduction 1); signal transducer/ transcription factor14214e-157
AT2G04890.1 SCL21 (SCARECROW-LIKE 21); transcription factor12825e-141
AT4G17230.1 SCL13 (Scarecrow-like 13); transcription factor11382e-124

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  22%
 
212  22%
 
115  56%

Unigene MembersMember information